Gene Sros_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3922 
Symbol 
ID8667212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4370923 
End bp4371309 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339581 
Protein GI271965385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00568747 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCGGTCCG TGTCGAATCA GCGGACCGGT CCCGGGGGAG AGTCACCCGA CAGCCGCCTT 
GCCTCCGTCC TGCGCTTCTC CACCGAGCTC GTCGCCTGGG TGGCCACGCC CTGGGCGCTG
TGGTCCCTCT CCGTCCCCCT GGCCCTGCTG TCGGTCGTGG TGCTCATCGG CCTGCCGACC
GTGTTCACCA CCCCCGGCGA CAAGGCCCAC GGGATGATCC CCGTGCCCGG TGCGGTGACC
GTCGTCCTGG TCCTCATGCA GCTGGCCGCG GCCGTGGTCT CCGCCTGGAC GGCCTGGTCC
GCCCCGGTCG CGATCGTGGT GAGCCTGCTC GCCGTGGCCT GTGTGGTCAC CGAGATCCCG
CGCTGGCGCT GGCTGGCCGT GCGGTGA
 
Protein sequence
MRSVSNQRTG PGGESPDSRL ASVLRFSTEL VAWVATPWAL WSLSVPLALL SVVVLIGLPT 
VFTTPGDKAH GMIPVPGAVT VVLVLMQLAA AVVSAWTAWS APVAIVVSLL AVACVVTEIP
RWRWLAVR