| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3911 |
|---|
| Symbol | |
|---|
| ID | 8667201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4357791 |
|---|
| End bp | 4358768 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | methanol dehydrogenase regulatory protein |
|---|
| Protein accession | YP_003339571 |
|---|
| Protein GI | 271965375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0358591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.240116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCG CCGAGGTGGG CAGGCACGCA CGCGAGGTGC TCGACCGGGT CAACACCGTC
GTGGTCGGCA AGCGTGAGGC GCTGGAGCTG GTGCTGGCCG GAATCCTGGC CGGCGGGCAT
GTGCTCCTGG AGGACTTCCC CGGCCTGGCC AAGACCCTCA CCGCCCGCTG CTTCGGGCAG
GTCCTCGGCC TGGACTTCAC CCGCCTGCAG TTCACCCCCG ACCTGCTGCC GGCCGATGTG
ACCGGCTCGT TCCTCTACAA CCAGCGCGAC GGCGACTTCG TCTTCCGCAG GGGCCCGGTC
TTCACCAACC TGCTGCTCGC CGACGAGATC AACCGCACTC CGCCCAAGAC CCAGGCGGCC
CTGCTGGAAG CCATGCAGGA ACGCCAGGTC AGCGTCGAAG GCGTCACGCA CCCGCTGCGG
GCCCCGTTCC ACGTGCTCGC CACCGCCAAC CCGATCGAGT ACGAGGGCAC CTACCCGCTG
CCCGAGGCCC AGCTCGACCG GTTCCTGCTC CGGGTGTCCT TCGGCTACCC CTCCCCGGAG
GAGGAGTGGA CGATGCTGGG ACGCCGGATG GCCCGCCGTA CCGAGGAGAG CACGCTCGAA
CCCGTCGTGG ACGCCGTCAC CCTCCAGGAG ATGCAGCGGG CCCTGGAGGA CGTGGCCGTG
GAGGACTCGG TCGGCCGCTA CATCGTCGAC CTCGTGTCCG CCACCCGGGA GCACCCCCAG
CTCCAGGTCG GGGCCTCCCC CCGCGGCTCG CTGGCCCTGC TGCTGACCTC CCGCGCCCGC
GCGGTGCTCG ACGGCCGCGA CTACGTCATC CCCGAGGACG TCAAGCGGGT CGCCCCGGCC
GCGCTGTCCC ACCGGATCAG CCTCCGTCCG GAGATGTGGC TGCGCCGCGT CGACCCGGTC
TCGATCATCG AGGAGGTCTG CGCCCGCACC CCCGTCCCTC CTTCCGGGCA GCTCCCCGCC
TACACCGGTG GCGAGTGA
|
|---|
| Protein sequence | MEPAEVGRHA REVLDRVNTV VVGKREALEL VLAGILAGGH VLLEDFPGLA KTLTARCFGQ
VLGLDFTRLQ FTPDLLPADV TGSFLYNQRD GDFVFRRGPV FTNLLLADEI NRTPPKTQAA
LLEAMQERQV SVEGVTHPLR APFHVLATAN PIEYEGTYPL PEAQLDRFLL RVSFGYPSPE
EEWTMLGRRM ARRTEESTLE PVVDAVTLQE MQRALEDVAV EDSVGRYIVD LVSATREHPQ
LQVGASPRGS LALLLTSRAR AVLDGRDYVI PEDVKRVAPA ALSHRISLRP EMWLRRVDPV
SIIEEVCART PVPPSGQLPA YTGGE
|
|---|
| |