Gene Sros_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3843 
Symbol 
ID8667133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4282107 
End bp4283129 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003339505 
Protein GI271965309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00298813 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0397253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGTA GGCGATCACG TGCGGTGACC ATAAGCGACG TGGCATCCCT GGCAGGGGTG 
TCGATCGCCA CCGCGTCCAA GGCGCTGAAC GGCCGGGACC AGGTGCGGGC GGAGACCCGG
CAGCGGGTGC TGGAGGCCGC GGAGGAGCTC GCCTTCCAGC CCAACGCCCT GGCCAGAGGG
CTGCTGTCCG GGCAGACCCG GACCGTCGGG CTGCTCACCA GCGACAGCGT CGGCAGGTTC
GGGATCCCGG TGCTGCTCGG CGCGGAGGAC GCGTTCGGGG CGGGGGAGAT GGCGCTGCTG
CTGTGCGACG CCCGTGGTGA CGCCATCCGC GAGCAGCACT ACATCCGCAC GCTGCTCTCC
CGGCGCGTGG ACGGCCTCAT AGTGGTCGGC GAGAGCACGA ACACGCGCTC GTCCATCAGC
CGCGACCTGC CCATCCCGGT GGTCTACGCC TACGGGGAGT CCGACAACCC GGACGACGTC
TCGTTCGTCC CCGACGACGT GGGCGGCGCG GTCCTCGCCG TACGGCACCT GCTGACCGCG
GGGCGGCGCA GGATCGCGCA CGTCACGGGA CCGATGGACT ACAAGGCCGC GAGGGACAGG
ACCGAGGGCC TGCGGAGGGC GCTGGAGGAG GCCGGCGTCG CCCAGGTCGG CGAGACGCTC
TCCGGTGCGT GGTCGCAGCG CTGGGGCCGG CACGCTGCGG AGATGCTGCT GATGGCCGAG
CCGGAGGTGG ACGCCGTCTT CTGCGGCAGC GACCAGATCG CGGCGGGGTT CGTCGAGGCC
ACCAGGGAGC GGGGCCGCCG CATCCCCGAC GACATCGCGG TCGTGGGCTA CGACAACTGG
GAGGTGTTCT CCACCGAGAC CCGGCCCGCG CTGACCACGG TCGACATGAA CCTGGAGACG
CTCGGCCGCA CCGCCGCCCA GCACCTGTTC GCCGCCATCG ACGGCCGTGC CACCCCGGGC
GTCCACCGCA TGCCCTGCCG GCTCGTCATC CGCGACTCCA CCGCGCCCCG GGGACCCTCC
TGA
 
Protein sequence
MVGRRSRAVT ISDVASLAGV SIATASKALN GRDQVRAETR QRVLEAAEEL AFQPNALARG 
LLSGQTRTVG LLTSDSVGRF GIPVLLGAED AFGAGEMALL LCDARGDAIR EQHYIRTLLS
RRVDGLIVVG ESTNTRSSIS RDLPIPVVYA YGESDNPDDV SFVPDDVGGA VLAVRHLLTA
GRRRIAHVTG PMDYKAARDR TEGLRRALEE AGVAQVGETL SGAWSQRWGR HAAEMLLMAE
PEVDAVFCGS DQIAAGFVEA TRERGRRIPD DIAVVGYDNW EVFSTETRPA LTTVDMNLET
LGRTAAQHLF AAIDGRATPG VHRMPCRLVI RDSTAPRGPS