Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3839 |
Symbol | |
ID | 8667129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4276888 |
End bp | 4278852 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003339501 |
Protein GI | 271965305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.254825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0525361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAGTC CTGTCCTGCC CTCCTCGGGC GCGCTGTCCC CTCTGGGGCT CGATTCGGTA CGGCTGACGC CGGGTTTCTG GGGCGACCGC GTCGCGCTCA ACCGCGAGGT CATCATCGCC CACTGCCAGG AGTGGATGGA GCGGGCCGGC TGGATCGGCA ACTTCCGCAG GCTCGGCGGG GACCCGGCCC GCCGCGACCC GGTCCTCCGG CAGGGCCGGG AGTTCAGCGA CTCGGAGATC TACAAGCTGC TGGAGGGGAT GGCCTGGGCC GGCCACCCCG CCCTGCCGGA GCTGGCCGCG ACCGTGGCAC GGGCGCAGGA GGAGGACGGC TACCTCAACA CCCGCTGGTA CGGCGACCGC TACACCGACT TCGAGTGGGG CCACGAGCTC TACTGCTACG GCCACCTGAT CCAAGCCGGC GTCGCACGGC TCCGCACGCA CGGCGAGGAC GAGCTGACCG GCGTCGTCCG GCGGGCGGCC GACCACATCT GCCGGCGCTT CATGGACACC TCCGAGACGT GCGGCCATCC CGTGGTGGAG ATGGCCCTGG TCGAGCTGTA CCGGGCGACC GGCGCCGAGC GCTACCTGGA GATGGCCCGC CGGTTCGTCG AGCGTCGCGG GCTGCCCGCG CTGGACGACA TCGAGTTCGG CCGCGCCTAC TTCCAGGACG ACCTCCCGGT ACGGCGGGCA CGGGTGTTCC GCGGCCACGC CGTACGGGCC GTCTACCTCG CCTCGGGAGC GGTCGACGTC GCCGTGGAGA CCGGTGACGC CGAGCTGCTG TCGGCGATCG AGGCGCAGTG GGAGCGCACC GTCGCCCGGC GCGTCCACCT GACCGGCGGC ATGGGCTCGC GCCACTCCGA CGAGGCCTTC GGCGACGACT TCGAGCTGCC GCCCGACCGG GCCTACTCCG AGACCTGCGC CGGGATCGGC TCGATCATGC TCGCCCACCG GCTGCTGCTG GCCACCGGCG ACGTGCGCTA CGCCGACCTG GCCGAGCGGA CCATGTTCAA CGTGCTGGCC ACCTCACCCG CGCTGGAGGG CCGCTCGTTC TTCTACGCCA ACCCGCTGCA CGTCCGCGTG CCCGCCGCGC CGCCGGAGGG GATGAACCCG GCCGCCGAGG GCGGCCTGCG CTCGCCGTGG TTCACCGTGT CGTGCTGCCC CAACAACATC GCCCGCACCT ACGCCTCCCT GGCCGCCTAC GTCGCGACCT CCGACGCCTC CGGCGTGCAG ATCCACCACC ACACCCCCGC CGAGATCCAC CACGAAGGCC TCGTCCTGCG CGTCGAGACC GGCTACCCGT GGTCGGGCGA GGTGACCGTC CGGGTGGTCA GGGGCGGATC GGGGCGGATC TCCCTGCGGG TCCCGCCGTG GGCCTCCGGT GCGCGGATCT CCCACGGCGG GACCACCCGC CCGGTGCCCG CGGGCTACGC GGTCGCCGAA GGGCGCTGGC GGCCGGGCGA CGAGATCCGC CTCCACCTGC CGATGACGCC CCGCTGGACC TACCCGGACC GCCGGGTGGA CGCCGTACGC GGCTGCGCGG CGGTCGAGCG CGGCCCGCTC GTCTACTGCG CCGAGTCGGT GAAGGACGAG CCCCCGCTCG CCCTCGTCGA GGCGCGGGTC TCGCCCCCGG TCGAGCACCT CGTCGACGGC GTCGTCGAGC TCGACGTCGA GGCCGTGCTC GTCTCCCCCG GGGCGGACGC CTGGCCGTAC GCCTCCTCGC CGCGGACGGG CGGCCCGGCG CGGGCGGAGG ACGCGGCGAC GCCGCCGGCG CCGCCGGCGC CGGGAAACGC GGACACGCCC GGACCGGCGG GGAAAGCGGA CACGCCCGAG CCGGCGGGGA AAGCGGGAAC CCCGGAGGAG CCTGTCCCGG TCCCCTCGGG AGAGCCCCTC AGGCTCGTGC CCTACCACCG CTGGGGCAAC CAGGGCCCCG CCACCATGCG CGTCTGGCTG CCCACCGCCG GCTGA
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Protein sequence | MASPVLPSSG ALSPLGLDSV RLTPGFWGDR VALNREVIIA HCQEWMERAG WIGNFRRLGG DPARRDPVLR QGREFSDSEI YKLLEGMAWA GHPALPELAA TVARAQEEDG YLNTRWYGDR YTDFEWGHEL YCYGHLIQAG VARLRTHGED ELTGVVRRAA DHICRRFMDT SETCGHPVVE MALVELYRAT GAERYLEMAR RFVERRGLPA LDDIEFGRAY FQDDLPVRRA RVFRGHAVRA VYLASGAVDV AVETGDAELL SAIEAQWERT VARRVHLTGG MGSRHSDEAF GDDFELPPDR AYSETCAGIG SIMLAHRLLL ATGDVRYADL AERTMFNVLA TSPALEGRSF FYANPLHVRV PAAPPEGMNP AAEGGLRSPW FTVSCCPNNI ARTYASLAAY VATSDASGVQ IHHHTPAEIH HEGLVLRVET GYPWSGEVTV RVVRGGSGRI SLRVPPWASG ARISHGGTTR PVPAGYAVAE GRWRPGDEIR LHLPMTPRWT YPDRRVDAVR GCAAVERGPL VYCAESVKDE PPLALVEARV SPPVEHLVDG VVELDVEAVL VSPGADAWPY ASSPRTGGPA RAEDAATPPA PPAPGNADTP GPAGKADTPE PAGKAGTPEE PVPVPSGEPL RLVPYHRWGN QGPATMRVWL PTAG
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