Gene Sros_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3798 
Symbol 
ID8667088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4233811 
End bp4235562 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content70% 
IMG OID 
Productcarbamoyl-phosphate synthase L chain ATP- binding protein 
Protein accessionYP_003339461 
Protein GI271965265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.608993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC GTTTCCGCAA GGTCTTGATC GCCAATCGTG GTGAGATCGC CGTGCGGATC 
GCCCGCGCAT GCAAGGACGC CGGGCTGGCC AGCGTCGCCG TCTACGCCGA CCAGGACCTC
GACGCCCTGC ACGTCCGCCT GGCCGACGAA GCCCACGCCC TGACCGGCAC CACCCCCGCC
GACACCTACC TCGCCATCGA CAAACTCCTC ACCATCGCCC ACACCAGCGG CGCCGACGCC
ATCCACCCCG GCTACGGCTT CCTCGCCGAA AACGCCACCT TCGCCCAAGC CGTCATCGAC
GCCGGCCTCA CCTGGATCGG CCCACCCCCA GCCGCGATCA CCGCCCTCGG CGACAAAGTC
GCCGCCCGCC ACATCGCCCA CCGCGTCGGC GCCCCCCTCG TCGCCGGAAC CCCCGACCCC
GTCACCAACG CCGACCAAGC CATCGCCTTC GCCCACCAAC ACGGCCTGCC CATCGCGATC
AAAGCCGCCT ACGGCGGCGG CGGCCGCGGC CTCAAAGTCG CCCGCACCAT CGCCGACATC
CCCCACGCCT ACGACAGCGC CGTCCGCGAA GCCACCGCCG CCTTCGGCCG CGGCGAATGC
TTCGTCGAAC GCTACCTCGA CCGCCCCCGC CACGTGGAAA CCCAATGCCT GGCCGACACC
CACGGCCACG TCGTCGTCGT CTCCACCCGC GACTGCTCCC TGCAACGCCG CCACCAAAAA
CTCGTCGAAG AAGCCCCCGC CCCCTTCCTG ACCGCCGAGC AGGAAACGCT GCTGCGTAAC
AGCTCCAAAG CCATCCTGCG CGAAGCCGGC TACACCGGCG CCGGCACCTG CGAATTCCTC
ATCGGCCAAG ACGGCACCGT CTCCTTCCTC GAAGTCAACA CCCGCCTACA GGTCGAACAC
CCCGTCACCG AAGAAGTCAC CGGCATCGAC CTGGTCGCCG AGATGCTCCG CATCGCCGAC
GGCCACCCCC TCGGCTACGA CGACCCCCCA CTACGCGGCC ACGCCATCGA ATTCCGCATC
AACGCCGAAG ACGCCGGCCG CGACTTCCTG CCCGCCCCCG GCACCATCAC CGCGATGCGC
ACCCCCGCCG GCCCCGGCAT CCGCCTGGAC GCCGGCTACG AAGCCGGCAT GACCGTCCCC
GGCGCCTTCG ACTCCCTCAT CGCCAAACTC ATCGTCACCG GCGCCACCCG CCACCAAGCC
CTGCGCCGCG CCCGCCGCGC CCTGGCCGAG TTCACCATCG ACGGCATGCC CACCGTGCTG
GACTTCCACC GCGCCATCGT CGAAGAGCAA GCCTTCACCG CCGAACCCTT CACCATCCAC
ACCCGATGGA TCGAAACCGA GTTCACCACC CCCATCGCCC CCTACGACGG CCCCACCGAA
ACCACCGAAC CGACCGGCCG CGAACGCCTC ACCGTCGAAG TCGGCGGCAA ACGCCTGGAA
GTGGTCCTGC CCGCCGGCTT CGCCACCCCC ACCCCCACCA CCGGCGGGCG GAGCCCACGC
CGAACCGCAC CGGGTAAGAA GACCGCCACC GGCGGCGACA GCCTGATCAG CCCGATGCAG
GGCACGATCG TGAAAGTCGT GGCCGCCGAC GGCGACACCG TCACCGCGGG CGATGTGATC
GTGGTGCTGG AGGCGATGAA GATGGAACAA CCCCTGACCG CCCACCAGAG CGGCACCGTG
ACGAACCTGA CCGCCTCGGC CGGGCAGAGC GTCACCGCCG GCGCGCTCAT CTGCGACATC
AAAAACACCT GA
 
Protein sequence
MNRRFRKVLI ANRGEIAVRI ARACKDAGLA SVAVYADQDL DALHVRLADE AHALTGTTPA 
DTYLAIDKLL TIAHTSGADA IHPGYGFLAE NATFAQAVID AGLTWIGPPP AAITALGDKV
AARHIAHRVG APLVAGTPDP VTNADQAIAF AHQHGLPIAI KAAYGGGGRG LKVARTIADI
PHAYDSAVRE ATAAFGRGEC FVERYLDRPR HVETQCLADT HGHVVVVSTR DCSLQRRHQK
LVEEAPAPFL TAEQETLLRN SSKAILREAG YTGAGTCEFL IGQDGTVSFL EVNTRLQVEH
PVTEEVTGID LVAEMLRIAD GHPLGYDDPP LRGHAIEFRI NAEDAGRDFL PAPGTITAMR
TPAGPGIRLD AGYEAGMTVP GAFDSLIAKL IVTGATRHQA LRRARRALAE FTIDGMPTVL
DFHRAIVEEQ AFTAEPFTIH TRWIETEFTT PIAPYDGPTE TTEPTGRERL TVEVGGKRLE
VVLPAGFATP TPTTGGRSPR RTAPGKKTAT GGDSLISPMQ GTIVKVVAAD GDTVTAGDVI
VVLEAMKMEQ PLTAHQSGTV TNLTASAGQS VTAGALICDI KNT