Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3798 |
Symbol | |
ID | 8667088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4233811 |
End bp | 4235562 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | carbamoyl-phosphate synthase L chain ATP- binding protein |
Protein accession | YP_003339461 |
Protein GI | 271965265 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.608993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGTC GTTTCCGCAA GGTCTTGATC GCCAATCGTG GTGAGATCGC CGTGCGGATC GCCCGCGCAT GCAAGGACGC CGGGCTGGCC AGCGTCGCCG TCTACGCCGA CCAGGACCTC GACGCCCTGC ACGTCCGCCT GGCCGACGAA GCCCACGCCC TGACCGGCAC CACCCCCGCC GACACCTACC TCGCCATCGA CAAACTCCTC ACCATCGCCC ACACCAGCGG CGCCGACGCC ATCCACCCCG GCTACGGCTT CCTCGCCGAA AACGCCACCT TCGCCCAAGC CGTCATCGAC GCCGGCCTCA CCTGGATCGG CCCACCCCCA GCCGCGATCA CCGCCCTCGG CGACAAAGTC GCCGCCCGCC ACATCGCCCA CCGCGTCGGC GCCCCCCTCG TCGCCGGAAC CCCCGACCCC GTCACCAACG CCGACCAAGC CATCGCCTTC GCCCACCAAC ACGGCCTGCC CATCGCGATC AAAGCCGCCT ACGGCGGCGG CGGCCGCGGC CTCAAAGTCG CCCGCACCAT CGCCGACATC CCCCACGCCT ACGACAGCGC CGTCCGCGAA GCCACCGCCG CCTTCGGCCG CGGCGAATGC TTCGTCGAAC GCTACCTCGA CCGCCCCCGC CACGTGGAAA CCCAATGCCT GGCCGACACC CACGGCCACG TCGTCGTCGT CTCCACCCGC GACTGCTCCC TGCAACGCCG CCACCAAAAA CTCGTCGAAG AAGCCCCCGC CCCCTTCCTG ACCGCCGAGC AGGAAACGCT GCTGCGTAAC AGCTCCAAAG CCATCCTGCG CGAAGCCGGC TACACCGGCG CCGGCACCTG CGAATTCCTC ATCGGCCAAG ACGGCACCGT CTCCTTCCTC GAAGTCAACA CCCGCCTACA GGTCGAACAC CCCGTCACCG AAGAAGTCAC CGGCATCGAC CTGGTCGCCG AGATGCTCCG CATCGCCGAC GGCCACCCCC TCGGCTACGA CGACCCCCCA CTACGCGGCC ACGCCATCGA ATTCCGCATC AACGCCGAAG ACGCCGGCCG CGACTTCCTG CCCGCCCCCG GCACCATCAC CGCGATGCGC ACCCCCGCCG GCCCCGGCAT CCGCCTGGAC GCCGGCTACG AAGCCGGCAT GACCGTCCCC GGCGCCTTCG ACTCCCTCAT CGCCAAACTC ATCGTCACCG GCGCCACCCG CCACCAAGCC CTGCGCCGCG CCCGCCGCGC CCTGGCCGAG TTCACCATCG ACGGCATGCC CACCGTGCTG GACTTCCACC GCGCCATCGT CGAAGAGCAA GCCTTCACCG CCGAACCCTT CACCATCCAC ACCCGATGGA TCGAAACCGA GTTCACCACC CCCATCGCCC CCTACGACGG CCCCACCGAA ACCACCGAAC CGACCGGCCG CGAACGCCTC ACCGTCGAAG TCGGCGGCAA ACGCCTGGAA GTGGTCCTGC CCGCCGGCTT CGCCACCCCC ACCCCCACCA CCGGCGGGCG GAGCCCACGC CGAACCGCAC CGGGTAAGAA GACCGCCACC GGCGGCGACA GCCTGATCAG CCCGATGCAG GGCACGATCG TGAAAGTCGT GGCCGCCGAC GGCGACACCG TCACCGCGGG CGATGTGATC GTGGTGCTGG AGGCGATGAA GATGGAACAA CCCCTGACCG CCCACCAGAG CGGCACCGTG ACGAACCTGA CCGCCTCGGC CGGGCAGAGC GTCACCGCCG GCGCGCTCAT CTGCGACATC AAAAACACCT GA
|
Protein sequence | MNRRFRKVLI ANRGEIAVRI ARACKDAGLA SVAVYADQDL DALHVRLADE AHALTGTTPA DTYLAIDKLL TIAHTSGADA IHPGYGFLAE NATFAQAVID AGLTWIGPPP AAITALGDKV AARHIAHRVG APLVAGTPDP VTNADQAIAF AHQHGLPIAI KAAYGGGGRG LKVARTIADI PHAYDSAVRE ATAAFGRGEC FVERYLDRPR HVETQCLADT HGHVVVVSTR DCSLQRRHQK LVEEAPAPFL TAEQETLLRN SSKAILREAG YTGAGTCEFL IGQDGTVSFL EVNTRLQVEH PVTEEVTGID LVAEMLRIAD GHPLGYDDPP LRGHAIEFRI NAEDAGRDFL PAPGTITAMR TPAGPGIRLD AGYEAGMTVP GAFDSLIAKL IVTGATRHQA LRRARRALAE FTIDGMPTVL DFHRAIVEEQ AFTAEPFTIH TRWIETEFTT PIAPYDGPTE TTEPTGRERL TVEVGGKRLE VVLPAGFATP TPTTGGRSPR RTAPGKKTAT GGDSLISPMQ GTIVKVVAAD GDTVTAGDVI VVLEAMKMEQ PLTAHQSGTV TNLTASAGQS VTAGALICDI KNT
|
| |