| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3783 |
|---|
| Symbol | |
|---|
| ID | 8667073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4206080 |
|---|
| End bp | 4207453 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003339447 |
|---|
| Protein GI | 271965251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00347065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG GGCAGCACTT CACCCGCCTC GCGGGGGGCG CCGCCCAGCC GGCGGGCCAT
GCGTCGCTGC GCCGGACCAA CCTCTCGCTG GTCCTGCGTC ACCTGCGTGA CCACGGCTCC
AGCTCGCGCG CCGACATCGC CGAGGCGACC GGCCTGCACC GTGCCACCGT ATCCAACCTG
ATGGCCGAGC TGCTCGAACG GCGGCTCGTC CGCGAGGTGG GCATCGAGCA CGCGGGGACG
GTCGGGCGTC CCCGGCGGGC GGTGGCGCTC GACGGCGCCC ACGTCGGGGT CCTGGGCCTG
GAGATCAACG TGGACTACGT CGCGGTCCAC GGCACCGACC TGGGCGGGCG TGTCCTGGTG
GAGCGCCGCG TCGGCTTCGA CGCGATGGGC AGCGGCACCA ACCACTCGCT GCGCGAGCTC
GGCCGGGTGG CCCGGCAGGC CATCGACGAG CTCACCCGGG CCGGGGCCGG ACCCTCCGGG
CTCGGGCCGG GTGACCTCGC GGCAGCCGGC GCGTCCGGCA TCGCGGCAGC CGGCGGCGGC
ATCAGAGTGG CCGGCATCGG AGTGGCCGTC CCCGGCCTGG TGGACGTCGG CCACGGTGTG
GTCGCGCTCG CGCCGAACCT CGGCTGGCGT GACGTGTCGC TCGCCTCCCG GCTGTCCGTC
GCGCTCGGCG ACGTGCGGGC CCCGGTGACG GTGGACAACG ACGCCAACCT CGCCGCGCTG
GCCGAATACA CCTCGGGCGT CGCCGCGGGG ACGGCCGACA TGGTCTACCT GACCGGCGAG
GTCGGCGTGG GCGGCGGCAT CATCGTCGGC GGCCGCCTGC TCCGCGGGGC GGACGGCTTC
TCCGGCGAGG TCGGGCACAT GCCCGTCGAC CCGGGCGGCA GCCGGTGCGG ATGCGGGCGC
AGCGGCTGCT GGGAGACCAA GGTCGGGCTC GCGGCGCTGG TGCGCATGGC GACGCCGGAC
CAGGCCTACG GGATGGGCAC CACCCCGGTG CCCGACCCCG AGGAGCGGGT GGCGGAGATC
GCCCGCGGGC TGGCCGGGGG CGATCCGCTG ATGCTCGCGG CGGTGGCGGA GGTCGGCCGG
TGGCTCGGGC TCGGCGGCTC GATCCTGGTC AACCTCTTCA ACCCCCGGGT CATCGTGGTC
GGCGGCTACT TCGCCACGCT GGCCCGGTGG CTTCTCCCGT TCGCCCAGGC GGAGCTGGAG
GACCTGGTCG TCGCCGGACC CGCCGCCCGC TGCCGCTTCG TCGCCTCCGA CCTCGGTTTC
GGCGCCGCGT CCCTGGGCGC CGCCAACGTT GTGATCAACC AGCTCATCGA CGACCCCACC
GCGATCGGCT CGCCGCCGGT CAGGCTCGCG GCCCCGCAGC CCACCGCCAC CTGA
|
|---|
| Protein sequence | MTQGQHFTRL AGGAAQPAGH ASLRRTNLSL VLRHLRDHGS SSRADIAEAT GLHRATVSNL
MAELLERRLV REVGIEHAGT VGRPRRAVAL DGAHVGVLGL EINVDYVAVH GTDLGGRVLV
ERRVGFDAMG SGTNHSLREL GRVARQAIDE LTRAGAGPSG LGPGDLAAAG ASGIAAAGGG
IRVAGIGVAV PGLVDVGHGV VALAPNLGWR DVSLASRLSV ALGDVRAPVT VDNDANLAAL
AEYTSGVAAG TADMVYLTGE VGVGGGIIVG GRLLRGADGF SGEVGHMPVD PGGSRCGCGR
SGCWETKVGL AALVRMATPD QAYGMGTTPV PDPEERVAEI ARGLAGGDPL MLAAVAEVGR
WLGLGGSILV NLFNPRVIVV GGYFATLARW LLPFAQAELE DLVVAGPAAR CRFVASDLGF
GAASLGAANV VINQLIDDPT AIGSPPVRLA APQPTAT
|
|---|
| |