| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3754 |
|---|
| Symbol | |
|---|
| ID | 8667044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4166107 |
|---|
| End bp | 4167051 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ornithine cyclodeaminase mu-crystallin |
|---|
| Protein accession | YP_003339419 |
|---|
| Protein GI | 271965223 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00106555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.298115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCC TGACCCGGAG CGACCTGGCC AAGGTCGAGC TCGGCCCGGC CGAGGTGATC
GCGGTCGTCG AGGAGGCCTA CCGGGCCCTG GCCGCCGGAT TGTCGGCCAA TCCGAGCAAG
CTGACGCTGC AGCCCCCCGA CGGGCACTCG GTCTCCTACG CCATGCTCGG CCGGGACGGC
ACCCGCGGGG TGGTCGCCTT CAAGACCTCC TACAGGTTCC ACTCCCGGCG GGAGTGCTAC
TACACCTCGC TGGCGCTCTA CGACGACGAG TCCGGGCTGC CCCTCGCCCT GATGGACTGC
GGCGGGATCG GCGCGATGCG CACCCCCGCG GTGTCGGCGC TGCTGGCGCG CGAGTGCGCC
GCCCCCGGCA GCCGCACCGC CCTGGTGATC GGCACCGGCG TGCAGGGGCG GCAGGCCCTG
CCGTACCTGA CGGCCACGAT GCCGGAGCTG GAGCGCCTCA TGGTCTTCGG CACCCACGCC
GACGGGCTGC GCGCCGTACG GGACTCGGTG CCCGGACGCG AGGTGGAGGA GGTGGCGGAC
CTGCGGTCAG CGGTGGAGGA GGCGGACGTG GTGCTGGGCG TCGCGGGCCC CTCCACCACC
GCGGCGGTGC AGGCGGACTG GCTCCGGCCG GACGCGCTGT GCGTGCTGGT CGGCTACGGC
CTGGCCCCTT CGACCCTGCA CCGGGCCGAC CGCGTGCTGG CCACCAGCGC CGCGCAGATG
GCGGTGACCG GCACCGACCT GGCCGACGAG CACGGCGTGC TGCGGCCGGT GGACGCCGAA
CTGCCCGACG TGCTCGTCGG CCGGGCCGAG GCGCGGTCCG GCGGCGGGCA GCGGATCTTC
GCCTACAACA GCGGCCTGGT CATCACCGAC ATCGCGCTCG GCCACCACTT CGCGCGGGCG
GCCGAGGAGC GCGGCATGGG ACAGGTGATC GATCTGTGGC GCTGA
|
|---|
| Protein sequence | MRVLTRSDLA KVELGPAEVI AVVEEAYRAL AAGLSANPSK LTLQPPDGHS VSYAMLGRDG
TRGVVAFKTS YRFHSRRECY YTSLALYDDE SGLPLALMDC GGIGAMRTPA VSALLARECA
APGSRTALVI GTGVQGRQAL PYLTATMPEL ERLMVFGTHA DGLRAVRDSV PGREVEEVAD
LRSAVEEADV VLGVAGPSTT AAVQADWLRP DALCVLVGYG LAPSTLHRAD RVLATSAAQM
AVTGTDLADE HGVLRPVDAE LPDVLVGRAE ARSGGGQRIF AYNSGLVITD IALGHHFARA
AEERGMGQVI DLWR
|
|---|
| |