Gene Sros_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3467 
Symbol 
ID8666755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3813185 
End bp3814210 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content72% 
IMG OID 
Producttransport system permease protein 
Protein accessionYP_003339146 
Protein GI271964950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.743348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00246309 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCGGA GCGGAGCGCT CCGGCCGGCC TTTCTCGTGG CGCTGCTCGG CGCCCTCCTC 
GTCGCGCTCT GCCTGCTGTC GCTCGCGCTC GGCGCCCTGA GCATCCCCCT TGACCAGGTC
GTACGGACGC TGCTCGGCCA CCCGGGCAGC ACTCTCGTCG AGAACGTCAT CTGGTCCGTG
CGCGTGCCGC GCACCGCGCT GGGCCTCACG GCCGGCGCGG CTCTCGGACT GTCCGGCGCG
CTCATGCAGG CGCTGACCCG CAACCCGCTC GCCGACCCCG GCATACTGGG CGTCAGCGCC
GGCGCCGCCT TCGCGATCGT GCTGTCGGTC GCGGTGCTCG GGCTGGGGAC GCTGCTCGGC
TACATCTGGT TCGCCTTCGC GGGCGCGCTC GTCGCGAGTG TCCTGGTCTT CATGCTGGGC
AAGCTGGGGC GGTCCGGTCT GACGCCGGTC AAGCTCGCGC TCGCCGGAGT CGCCGTGACC
TCGCTGCTGT CCTCACTCAC CAGCGCCGTC GTCCTGACCA ACCCGGAGGC GCTCAACCGC
TACCGTTTCT GGTCGGCCGG CTCGCTCGCC GACCAGAACG GCGATGTGGT GCTCCATCTC
CTGCCGTTCG TCATCGCCGG CACCGTACTG GCGCTGGCCT GCGCGCCCAC GCTCAACAGC
ATGGCCCTCG GTGACGACGT GGCCGCCTCG CTGGGGCGGC GGCTGGGTCT CGTACGGCTG
CAGGGCGTGA TCGCGATCAC GCTGCTGACC GGCGGGGCGG TGGCGGTCAT CGGGCCGGTC
GTCTTCCTCG GGCTGGTCGT CCCGCACATC GCCCGGGTCC TGGCCCAGTA CGCCGGCCTG
GGCCCCGATC ATCGCTGGCT GCTGCCGCTG TCGGCGGTGC TCGCCCCCTG CCTGCTGCTC
GTCGCGGACA TCATCGGACG GGTCGTCGGC CGGCCGGTCG AGATCCAGGC CGGGATCCTG
GTCGCCTTCA TCGGCGGCCC GTTCTTCATC ACCATGGTCC GCCGCCGTCG GCTCGCGGAG
GTGTGA
 
Protein sequence
MTRSGALRPA FLVALLGALL VALCLLSLAL GALSIPLDQV VRTLLGHPGS TLVENVIWSV 
RVPRTALGLT AGAALGLSGA LMQALTRNPL ADPGILGVSA GAAFAIVLSV AVLGLGTLLG
YIWFAFAGAL VASVLVFMLG KLGRSGLTPV KLALAGVAVT SLLSSLTSAV VLTNPEALNR
YRFWSAGSLA DQNGDVVLHL LPFVIAGTVL ALACAPTLNS MALGDDVAAS LGRRLGLVRL
QGVIAITLLT GGAVAVIGPV VFLGLVVPHI ARVLAQYAGL GPDHRWLLPL SAVLAPCLLL
VADIIGRVVG RPVEIQAGIL VAFIGGPFFI TMVRRRRLAE V