Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3467 |
Symbol | |
ID | 8666755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3813185 |
End bp | 3814210 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transport system permease protein |
Protein accession | YP_003339146 |
Protein GI | 271964950 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.743348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00246309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTCGGA GCGGAGCGCT CCGGCCGGCC TTTCTCGTGG CGCTGCTCGG CGCCCTCCTC GTCGCGCTCT GCCTGCTGTC GCTCGCGCTC GGCGCCCTGA GCATCCCCCT TGACCAGGTC GTACGGACGC TGCTCGGCCA CCCGGGCAGC ACTCTCGTCG AGAACGTCAT CTGGTCCGTG CGCGTGCCGC GCACCGCGCT GGGCCTCACG GCCGGCGCGG CTCTCGGACT GTCCGGCGCG CTCATGCAGG CGCTGACCCG CAACCCGCTC GCCGACCCCG GCATACTGGG CGTCAGCGCC GGCGCCGCCT TCGCGATCGT GCTGTCGGTC GCGGTGCTCG GGCTGGGGAC GCTGCTCGGC TACATCTGGT TCGCCTTCGC GGGCGCGCTC GTCGCGAGTG TCCTGGTCTT CATGCTGGGC AAGCTGGGGC GGTCCGGTCT GACGCCGGTC AAGCTCGCGC TCGCCGGAGT CGCCGTGACC TCGCTGCTGT CCTCACTCAC CAGCGCCGTC GTCCTGACCA ACCCGGAGGC GCTCAACCGC TACCGTTTCT GGTCGGCCGG CTCGCTCGCC GACCAGAACG GCGATGTGGT GCTCCATCTC CTGCCGTTCG TCATCGCCGG CACCGTACTG GCGCTGGCCT GCGCGCCCAC GCTCAACAGC ATGGCCCTCG GTGACGACGT GGCCGCCTCG CTGGGGCGGC GGCTGGGTCT CGTACGGCTG CAGGGCGTGA TCGCGATCAC GCTGCTGACC GGCGGGGCGG TGGCGGTCAT CGGGCCGGTC GTCTTCCTCG GGCTGGTCGT CCCGCACATC GCCCGGGTCC TGGCCCAGTA CGCCGGCCTG GGCCCCGATC ATCGCTGGCT GCTGCCGCTG TCGGCGGTGC TCGCCCCCTG CCTGCTGCTC GTCGCGGACA TCATCGGACG GGTCGTCGGC CGGCCGGTCG AGATCCAGGC CGGGATCCTG GTCGCCTTCA TCGGCGGCCC GTTCTTCATC ACCATGGTCC GCCGCCGTCG GCTCGCGGAG GTGTGA
|
Protein sequence | MTRSGALRPA FLVALLGALL VALCLLSLAL GALSIPLDQV VRTLLGHPGS TLVENVIWSV RVPRTALGLT AGAALGLSGA LMQALTRNPL ADPGILGVSA GAAFAIVLSV AVLGLGTLLG YIWFAFAGAL VASVLVFMLG KLGRSGLTPV KLALAGVAVT SLLSSLTSAV VLTNPEALNR YRFWSAGSLA DQNGDVVLHL LPFVIAGTVL ALACAPTLNS MALGDDVAAS LGRRLGLVRL QGVIAITLLT GGAVAVIGPV VFLGLVVPHI ARVLAQYAGL GPDHRWLLPL SAVLAPCLLL VADIIGRVVG RPVEIQAGIL VAFIGGPFFI TMVRRRRLAE V
|
| |