Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3465 |
Symbol | |
ID | 8666753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3811238 |
End bp | 3812071 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003339144 |
Protein GI | 271964948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.779274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00205843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGACCA CCGACCCGGA CCTGCGGGCG AGCGGACTGC ACCTGGCGTA CGACAACCGG CTGGTGGTGG AGGACCTCGA CGTGGTCATC CCGCCGGGCC GCGTCACCGC CATCGTCGGC GCCAACGCCT GCGGCAAGTC CACCCTGCTG CGGGCTCTGG CACGGCTGCT CGCGCCGCGC CGGGGCGCCG TCCAGCTCGA CGGCCGGGCC CTGCACTCCA TCCCCACCAG GGAGCTGGCC CAGCGCCTGG GCATCCTGCC GCAGACGCCG GTCGCCCCGG AGGGGCTGAC GGTCATCGAC CTGGTCAACC GGGGCCGGTC GCCGCACCAG ACCTGGTGGC GGCAGTGGTC GAAGGCCGAC GAGCAGGCCG TCCGCGGCGC ACTGGCCGCC ACCGGCATGA CCGGCCTCGC CGACCGCGCG GTCGACGAGC TCTCCGGCGG CCAGCGCCAG CGTGCCTGGA TCGCCATGGC CGTCGCCCAG GGCACCCCGG TGCTGCTGCT GGACGAGCCG ACGACCTACC TGGACCTGGC CCACCAGATC GACGTCCTGG ACCTGATCAC GGACCTCAAC CGGCACGAGG GCCGCACGGT CGTGATGGTC CTGCACGACC TCAACCAGGC CTGCCGGTAC GCCGACCACG TCATCGCCAT GAAGTCCGGC CGCATCGTCG CCGAGGGCGT CCCGTCCGAC GTCATCACGG CCCGCACCGT GGAGGAGATC TTCGATCTGC GCTGCCAGGT CACGACGGAC CCGGTCAGCG GCACACCGCT GATCATCCCG ATGAGCCGCC ACCACGGCGC CTCCGCCATC AGGGCGGTCG CCGAGACGGC CTGA
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Protein sequence | MSTTDPDLRA SGLHLAYDNR LVVEDLDVVI PPGRVTAIVG ANACGKSTLL RALARLLAPR RGAVQLDGRA LHSIPTRELA QRLGILPQTP VAPEGLTVID LVNRGRSPHQ TWWRQWSKAD EQAVRGALAA TGMTGLADRA VDELSGGQRQ RAWIAMAVAQ GTPVLLLDEP TTYLDLAHQI DVLDLITDLN RHEGRTVVMV LHDLNQACRY ADHVIAMKSG RIVAEGVPSD VITARTVEEI FDLRCQVTTD PVSGTPLIIP MSRHHGASAI RAVAETA
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