Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3351 |
Symbol | |
ID | 8666639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3677969 |
End bp | 3679033 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | LacI family transcription regulator |
Protein accession | YP_003339033 |
Protein GI | 271964837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.428373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0034898 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGACGGTG AACTCACGAA TACCTCCCGG TCCCGCCCCG ACGGCGCGGG TATCCGGCTG GCCGACATCG CCGCCCAGTC GGGGGTGAGC GAGGCCACGG TCAGCCGGGT GCTCAACGGC AAGCCCGGCG TGTCGCAGGG GACCAGGCAG GCGGTGCTGA CCGCGCTCGA CCTCATGGGC TACGAGCGGC CGCAGCGGCT GCGCCAGCGC AGCAACGGGC TGATCGGCCT GGTCACCCCG GAGCTGGACA ACCCGATCTT CCCGGCGTTC GCCCAGGCGA TCGAGAAGGC GCTGACCCAG CACGGCTACA CCCCGGTGCT CTGCACCCAG CTCCCCGGTG GCGCCCCCGA GGACGAGTTC ACCGAGCTGC TGATAGACCG CGGGGTCAGC GGCATCGTCT TCGTCTCCGG TCTGCACGCC GACACCACGG CCAAGATGGA CCGCTACACC CGGCTGACCG ACCGCGGACT GCCGATCGTC CTGCTGGACG GCTACAGCGG ACGCATCGAG GCGCCGTTCA TCTCCCCGGA CGACCGGGCC GCCGCGCGGC TGGCCGTACA GCATCTGGTG GATCTCGGGC ACGAGCGGAT CGGCCTGGCC GTCGGACCGC GCCGGTTCGT GCCGGTGATC CGCAAGATCG AGGGTTACCG GCAGGCGATG GCGCAGCTGC TGGGGGCGGG CGAGGTGGAT GAGCTGATCT CGCATTCGCT GTTCTCGGTT GAGGGGGGTC AGGCGGCGGC GGCGCAGTTG CTGGAGCGGG GGTGCACGGG CATCGTGTGC GCCTCGGATC TGATGGCGCT GGGGGCGATC CGGGCGTGCC GGGATCGGGG GTTGTCGGTT CCGGCGGACG TGTCGGTGGT GGGGTTCGAC GACTCGCCGC TGATCGCCTT CACCGACCCG CCGCTGACCA CCGTGCGCAA GCCCATCGGC GCGATGGCCT CGGCCGCGGT GGCCACTCTC CTGGAGGAGA TCAACGGCAT CCGGAGCAGG CACATCGAGC TGATGTTCCA GCCCGAGCTG GTCGTGCGCC GCTCGACCGG CTCAGGCCCG CTGGTCAACC GCTAG
|
Protein sequence | MDGELTNTSR SRPDGAGIRL ADIAAQSGVS EATVSRVLNG KPGVSQGTRQ AVLTALDLMG YERPQRLRQR SNGLIGLVTP ELDNPIFPAF AQAIEKALTQ HGYTPVLCTQ LPGGAPEDEF TELLIDRGVS GIVFVSGLHA DTTAKMDRYT RLTDRGLPIV LLDGYSGRIE APFISPDDRA AARLAVQHLV DLGHERIGLA VGPRRFVPVI RKIEGYRQAM AQLLGAGEVD ELISHSLFSV EGGQAAAAQL LERGCTGIVC ASDLMALGAI RACRDRGLSV PADVSVVGFD DSPLIAFTDP PLTTVRKPIG AMASAAVATL LEEINGIRSR HIELMFQPEL VVRRSTGSGP LVNR
|
| |