Gene Sros_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3341 
Symbol 
ID8666629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3657691 
End bp3658569 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative sugar ABC transporter, permease protein 
Protein accessionYP_003339023 
Protein GI271964827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.22127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.118781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CCACCGCAGG TCCCGCGAGG CGCCGGCGCG CCCGCAGCCG CGAGGAGCGC 
AGCATCGGCA GCTCGATCCT GCTGCACGGC ACGCTCATCG CCGCGTCTCT CATCGCGCTG
TTCCCCATCG TGTGGCTGAT CCTGACCTCG CTCAAGCCGC GCGACGGCTG GCTCTCCAGC
GAACTGAAGT TCTTCGACAA CTCGTCGCTG GACAACTACG CCCGGGTGCT GACCGAGACG
CAGTTCCCGA ACTGGCTGCT CAACTCCGTG ATCATCGCGG GGCTGACCAC GGTCATCGGC
GTGTTCCTGG CCTCGACGAC CGGGTACGCG ATCAGCCGCT TCCGGTTCCC GGGCTACCGC
GGCGTCATGT GGATGCTGCT GATCACCCAG ATGTTCCCGG TGGCGATCCT GATCGTGCCG
CTCTACAACC TGATGGCGGG TCTCGGGCTG CTCAACCAGA TCCCGGGCCT GGTCATCGCC
TACATGACCG TGGCGGTCCC GTTCTGCGCA TGGATGATGA AGGGCTACTT CGACTCCATC
CCGCGCGAGA TCGACCAGGC CGGCATGATC GACGGGCTGA CCCCGTTCGG CACCTTCTGG
CGGGTCATCC TGCCGCTGGC CCGGCCGAGC ATCGCGGTCA CCGCGTTCTA CTCCTTCATG
ACCGCCTGGG GCGAGGTCGC CTACGCCTCG GTCTTCATGA CGGGGGAGGA GACGCGCACC
CTCGCGGCGG GCCTGCAGCA GTTCGTCGGC CAGCACTGGT CCGACTGGGG CCTGCTGACC
GCCTCGGCCG TGCTGATCGC GCTGCCCGCG GCGGTCGTCT TCCTGCTGGT CCAGCGTCAC
CTGGTCGCCG GGCTCACGGC CGGCGCCACC AAGTCGTAA
 
Protein sequence
MSTATAGPAR RRRARSREER SIGSSILLHG TLIAASLIAL FPIVWLILTS LKPRDGWLSS 
ELKFFDNSSL DNYARVLTET QFPNWLLNSV IIAGLTTVIG VFLASTTGYA ISRFRFPGYR
GVMWMLLITQ MFPVAILIVP LYNLMAGLGL LNQIPGLVIA YMTVAVPFCA WMMKGYFDSI
PREIDQAGMI DGLTPFGTFW RVILPLARPS IAVTAFYSFM TAWGEVAYAS VFMTGEETRT
LAAGLQQFVG QHWSDWGLLT ASAVLIALPA AVVFLLVQRH LVAGLTAGAT KS