| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3266 |
|---|
| Symbol | |
|---|
| ID | 8666554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3553659 |
|---|
| End bp | 3555194 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003338949 |
|---|
| Protein GI | 271964753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCGG GAGCCATCGC AGCAGTTTCG CCGGACAAGC CCGCTGTGAT CATGGCGGAC
TCCGGACAGG TCGTGACCTT CCGCGAGCTG GACGAGGAGT CCAACCGGCT CGCCCACCTG
TTCCGCGCCG CCGGACTCCG GCCGGGCGAC CACATCGCCT TCATGCTGGA GAACCATCCG
CTGTTCCTGG CGGTCGCCTG GGCCGCGCAC CGGTCGGGCC TGTACTACAC GGCCATCAGC
TCGCGGCTGA AGACCGACGA ACTCGCCTAC ATCGTGGACA ACTGCGAGGC GCGCGTGTTC
GTCTCCTCCG CGAAGCTGGC GGAGGTCGCC ACCTCGATCA CCGGTGCGAC GCCGAAAGTG
GAGCTCAGGC TCATGCTGGA CGGTGTCGCC CCCGGGTTCG GCTCCTACGA GGAGGCGGTG
GCCTCCCACC CCGCCACGCC CATCGAGGAC GAGTGCCAGG GCATGGACAT GCTCTACTCC
TCCGGCACCA CCGGGCGGCC CAAGGGCGTC AAACCCACCC TGTCCCAGGC TCCGCTGGAC
ACGCCGGGGC CGCTGCTGCA GCTCATCCAG TTCCTGTTCG CACCGTCGGC CGACAGCGTC
TACCTCTCCC CGGCCCCGCT GTACCACGCC GCCCCGCTGC GCTACTGCAT GACCTTCCAG
CGCCTCGGCG CGACGCTCGT GGTGATGGAG AGGTTCGACC CCGAGCAGGC GCTCGCTCTG
ATCGAGAAGT ACGGCGTCAC GCACTCGCAA TGGGTGCCGA CCATGTTCAT CAAGATGCTC
AAGCTGCCGG AGCCGGTACG GGTACGGTAC GACCTGTCGT CGCTGGCCTG CGCGATCCAC
GCCGCCGCGC CCTGCCCGGT CCCGGTCAAG GAACGGATGA TCGAGTGGTG GGGGCCGATC
GTCCACGAGT ACTACGCCGG GACCGAGGGC AACGGATTCC TCTACGTCGG GCCCGACGAC
TGGCTCAAGC ACAAGGGTAC GGTCGGCCGC CCGCTGCTCG GCGTGGTGCA CATCTGCGAC
GAGGACGGCA ACGAGCTGCC GCCGCGCGAG CACGGCACCG TCTACTTCTC CGACGGCCCC
CGCTTCGTCT ACCACGGCGA CGAGGAGAAG ACGAGATCCT CGCGGGACCC GCTGGGCCGG
GGCTGGACCA CCCTCGGCGA CATCGGCTAC CTCGACGAGG AGGGCTTCCT CTACCTCACC
GACCGCCGCT CATACATGAT CATCTCGGGA GGGGTGAACG TCTATCCGCA GGAGGCCGAG
AACGTCCTCT CCGTGCATCC GAAGGTGGCG GACGTGGCGG TCTTCGGCAT CCCGGACGAG
GAGATGGGAG AGCAGGTCAA GGCCGTCGTG CAGCCGATCT CCATGGACCT GGCCGGTCCG
GGGCTGGAGG CCGAGCTGAT CGACTACTGC CGCTCCCAGC TCGCCCCCTA CAAGTGCCCC
AGGTCCGTCG ACTTCCGTGA GGAGCTGCCC CGGCATCCCA CCGGGAAGCT CTACAAGCGC
CTCCTCCGCG ACGAGTACTG GCCCGCCGGC CACTGA
|
|---|
| Protein sequence | MHPGAIAAVS PDKPAVIMAD SGQVVTFREL DEESNRLAHL FRAAGLRPGD HIAFMLENHP
LFLAVAWAAH RSGLYYTAIS SRLKTDELAY IVDNCEARVF VSSAKLAEVA TSITGATPKV
ELRLMLDGVA PGFGSYEEAV ASHPATPIED ECQGMDMLYS SGTTGRPKGV KPTLSQAPLD
TPGPLLQLIQ FLFAPSADSV YLSPAPLYHA APLRYCMTFQ RLGATLVVME RFDPEQALAL
IEKYGVTHSQ WVPTMFIKML KLPEPVRVRY DLSSLACAIH AAAPCPVPVK ERMIEWWGPI
VHEYYAGTEG NGFLYVGPDD WLKHKGTVGR PLLGVVHICD EDGNELPPRE HGTVYFSDGP
RFVYHGDEEK TRSSRDPLGR GWTTLGDIGY LDEEGFLYLT DRRSYMIISG GVNVYPQEAE
NVLSVHPKVA DVAVFGIPDE EMGEQVKAVV QPISMDLAGP GLEAELIDYC RSQLAPYKCP
RSVDFREELP RHPTGKLYKR LLRDEYWPAG H
|
|---|
| |