Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3167 |
Symbol | |
ID | 8666455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3448556 |
End bp | 3450184 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | ABC-type dipeptide transport system periplasmic component-like protein |
Protein accession | YP_003338855 |
Protein GI | 271964659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACATGC GTACCCTCGG ACGCTGGTCC GGCGCCGTCA CGGCCGTCGT GACCGCGCTG ACGCTCACGT CGTGCGGCCT CAACGAGGGC CAGGACGCCT CGAAGCCGGC CGGTGGCGAC AGCTCCACCA CGCTGCGCAT CGGCACCACC ACCGACGTCG CGAACTTCAA CCCGCTGCAG TCGCTGAGCA AGACCGACAA CTGGATTCTC AACGCGATGT ACCCACACCT GCTGCGGATC GACGGGGACG CCAAGAAGGT CCCCGAGCTC GCCAGCAAGT ACACCCACGA AGACGGTGGC AAGTCGGTCG TCTTCACCCT GCGCGACGAT TTCGTGTGGA GTGACGGCAC CCCGGTGACG TCGGCCGACG TGAAGTACTC GGCCGAGACG ATCATGAAGA ACAAGCTCGG GAACGTGGCC GCGAAGCTCA CCTGGGTCGA GGGCATCGAG GCGCCCGACG CCACCACGGT GGTCTTCAAG CTCAGCCAGC CCTACGCGCC GTTCGCCGAA GGCGTGGGCT TCTGGATGTC CATCGTCCCC AAGCACATCT TCGAGAAGGC CGGCGACATC ACCAAGTTCG CCAACAACTC CGATTGGGTC GGCGCGGGCG CCTACATCCT GAAGAGCGCC ACGCCCGGTC AGCGCTACGT GATGACGCGC AACGACAAGT ACCCCTACGC GCCCGCGGGC GGCGCGGCCG TCGACACCGT CGAGTACCGG CTGTACCCGG ACGTCAACAC CATGCAGCTC GCGTTGCGCA ACGGCGACAT CGACCTGATG GGCACGCCGG TGCCCGCCTC GGCCATCGCC TCGTTCAGCG GCGACGAGAA GATCAAGCTG CAGGAGGTCG GCTCGCTGGG CTTCGCCCAC ATCACCTACA ACGTCACCAA CGAGCACCTG GCCCGGCCGA AGGTCCGGCA GGCGCTGTCG ATGGTCGTCG ACACCAAGTC GATCATCTCT ACGGTGCTGC AGGGTGAGGG CTCACCGATG ACCGGCCCGA TCTCACCGAT CTTCGCGGAG TACGACAACA CCGAGCTCCA GCCGTACCCG TTCGACCCGG CCGCCGCGCG CAAGCTGCTC GAAGAGGACG GATACGCGGA CAAGAACGGC GACGGGAAGC TCGACGGCCT GTCCTTCGAG ATGGTCTGCG ACCAGAGCAA CCCGAACCTG ACCCGGGTCG CCCAGGTGGT GCGGGAGGAC GCCGCCAAGG CCGGCGTCGA ACTCGTCGCG TCGTGTGTCG AGCGGAACAC GTTCCTCAGC AGGACCAAGA GCGGCGACTA CGACCTCGAC GTCTCGCAGT GGGCCGTCTT CGACAACCCG ATGGACCAGC TCCGCAGCAC CTACCTGTCG AGCAACCCGG GCGGCATCAA CTACAACCTG GTCAAGGACC CGAAGCTCGA CAAGCTCATC GACGAGGCCG CCGTCACGAC CGACCACGAC AAGTTCGCGG GGAAGATCAA GGACCTTGAC GCCTACGTGC ACGAGCAGGC GCTGCTGACG CCGCTCTACG TCGAGAAGAT CCAGTTCGCC TACAACGCCG GCAAGTTCAC CGGCTTCCAG CCCTCGCCCA GCGATCTGCT CGGCATGGTG ACCGGCTACT CGCTGTCGCA GGTCCGACCC GTCGGCTGA
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Protein sequence | MNMRTLGRWS GAVTAVVTAL TLTSCGLNEG QDASKPAGGD SSTTLRIGTT TDVANFNPLQ SLSKTDNWIL NAMYPHLLRI DGDAKKVPEL ASKYTHEDGG KSVVFTLRDD FVWSDGTPVT SADVKYSAET IMKNKLGNVA AKLTWVEGIE APDATTVVFK LSQPYAPFAE GVGFWMSIVP KHIFEKAGDI TKFANNSDWV GAGAYILKSA TPGQRYVMTR NDKYPYAPAG GAAVDTVEYR LYPDVNTMQL ALRNGDIDLM GTPVPASAIA SFSGDEKIKL QEVGSLGFAH ITYNVTNEHL ARPKVRQALS MVVDTKSIIS TVLQGEGSPM TGPISPIFAE YDNTELQPYP FDPAAARKLL EEDGYADKNG DGKLDGLSFE MVCDQSNPNL TRVAQVVRED AAKAGVELVA SCVERNTFLS RTKSGDYDLD VSQWAVFDNP MDQLRSTYLS SNPGGINYNL VKDPKLDKLI DEAAVTTDHD KFAGKIKDLD AYVHEQALLT PLYVEKIQFA YNAGKFTGFQ PSPSDLLGMV TGYSLSQVRP VG
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