Gene Sros_3073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3073 
Symbol 
ID8666360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3353396 
End bp3354229 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID 
Productsugar ABC transporter permease 
Protein accessionYP_003338766 
Protein GI271964570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.146884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGA GGCTCGCCTT CTGGCTGCGG CGCGCGGGCA TGTACGTCCT GCTGACCGCG 
ATCGCCCTCG TCTTCGTCGG CCCGTTCCTG ATCCTGCTCT CGGCGGCCTT CAAGCCCGCC
GGCCAGGCCG TCTTCTCCTT CCCGCCCGAC GTCATCCCCC GGCCCCCGGT CCTGACCTGG
GTGAAGGAGG CGTGGACGAC CATCCCCTAC CCGACCTACC TGATCAACTC GGTCATCTAC
GTCGGCGTGA TGGTGCCCGT GTACATCATC GTCTCCGCGC TGTGCGCCTA CCCGCTCGCC
CAGATGAACT TCCGCGGCCG GAACCTCATC TTCTTCGCCA TCCTGTCGAC GATGTTCCTG
CCGGGCGAGG TCATGCTCCT CCCCCGCTTC CTGGTGGTCT CGCAGCTCGG CATGGCCGAC
AGCTACGCGG GCGTGATCCT GCCCGGACTG CTGTCGGCCT TCGGGATCTT CCTGCTCCGC
CAGACCTTCA CGGGCGTGCC GCGCGAGGTC ATCGACGCTG CGCGCACCGA CGGCTGCCAC
GAGCTGAGGA TCTTCTGGCA CGTCATGCTG CCCGCCGCGC GCCCCACCCT GGCGATTCTC
GGCATCTTCG GCTTCATCTC GGTCTGGAAC AGCTTCATAT GGCCGATGGT CGTGCTGAAG
GACTCCGCGA TGTACCCGAT CGCCCTGGGG ATCTCCTACC TCGCGGGCGT CACCGGCACC
GACGTCCGCA GCCTCGCCGC CGGAACCGTC ATCTCGATCC TGCCCGTCGT CATCTTCTTC
ATGATCATGC AACGTCACGT ACTCGAAGGC ATGCGCGGCG CGGTCAAGGG CTGA
 
Protein sequence
MTPRLAFWLR RAGMYVLLTA IALVFVGPFL ILLSAAFKPA GQAVFSFPPD VIPRPPVLTW 
VKEAWTTIPY PTYLINSVIY VGVMVPVYII VSALCAYPLA QMNFRGRNLI FFAILSTMFL
PGEVMLLPRF LVVSQLGMAD SYAGVILPGL LSAFGIFLLR QTFTGVPREV IDAARTDGCH
ELRIFWHVML PAARPTLAIL GIFGFISVWN SFIWPMVVLK DSAMYPIALG ISYLAGVTGT
DVRSLAAGTV ISILPVVIFF MIMQRHVLEG MRGAVKG