| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2960 |
|---|
| Symbol | |
|---|
| ID | 8666247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3223622 |
|---|
| End bp | 3224392 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003338658 |
|---|
| Protein GI | 271964462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.587097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTTG AGATCAAGGA CATCCATGTC CACTACGGCA AGATCGCGGC GCTCAAGGGC
ATCTCGGTCG AGGTGAACGA GGGCGAGATC GTCACGCTCA TCGGAGCGAA CGGGGCGGGC
AAGACCACGA CCCTGAAGAC GATCTCGGGC CTGCGCGGTC TGTCGTCGGG CACCATCACC
TTCGACGGCA AGGACATCAG CAAGCTGCCC GGCCACAAGC GGGTCATGGC GGGCCTGGGA
CAGGCGCCCG AGGGCCGGGG CGTCTTCCCC GGCATGACGG TGTACGACAA CCTGCTCATG
GGCGCCTACA CGCGCTCCGG GGACTTCGGC GACGACCTGG CAGAGGTCTT CGAGCTGTTC
CCGCGCCTGG CCGAGCGCAA GACGCAGATG GGCGGCACGA TGTCGGGCGG CGAGCAGCAG
ATGCTGGCCA TCGGCCGGGC GCTGATGGCC AAGCCGAAGG TCCTGCTGCT GGACGAGCCG
TCGATGGGCC TGGCGCCGCT GATGGTGCAG CAGATCTTCT CCATCATCGA GGAGATCAAT
CGGCGGGGCA CCACGGTGCT GCTGGTGGAG CAGAACGCCC AGCAGGCGCT GAAGCTCGCC
CACCGGGCCT ATGTGCTGGA GACCGGGAAG GTGGTCAAGA GCGCGCCCGC CGCGGATCTG
CTCGACGACC CCGACGTGCA GGCCGCCTAT CTCGGCGGCG GTCTCGGTCA CGACGCGCCG
CCGGAGCGGG ACGGGGCGGA GAGCCGCGAC GTGCCGGGCG AGCAGGCGTG A
|
|---|
| Protein sequence | MLLEIKDIHV HYGKIAALKG ISVEVNEGEI VTLIGANGAG KTTTLKTISG LRGLSSGTIT
FDGKDISKLP GHKRVMAGLG QAPEGRGVFP GMTVYDNLLM GAYTRSGDFG DDLAEVFELF
PRLAERKTQM GGTMSGGEQQ MLAIGRALMA KPKVLLLDEP SMGLAPLMVQ QIFSIIEEIN
RRGTTVLLVE QNAQQALKLA HRAYVLETGK VVKSAPAADL LDDPDVQAAY LGGGLGHDAP
PERDGAESRD VPGEQA
|
|---|
| |