| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2925 |
|---|
| Symbol | |
|---|
| ID | 8666211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3182993 |
|---|
| End bp | 3183907 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF6, transmembrane |
|---|
| Protein accession | YP_003338623 |
|---|
| Protein GI | 271964427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.181381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCCCG CTGACATCCT TGGCATAGGC GTCCTCGCCT CCGTCTGGGG CACGAACTTC
CTCCTGGTCG AAGAGGCGCT GGAGGGGCTC GACCCCATCC AGATCGTCCT GATCCGGCTG
GTGCTGGGCG CGGCGGCCCT GGTGCTCCTC GCCCGCGCCC GCCGTACGGC GCTGCCGCAC
GGGGGCGTGG TATGGCTGAA GCTGGCCGGG ATGGGGCTGC TGGGCCAGGC CGTGCCCTGG
CTGCTGTTCG CCTGGGGGCA GCGGGAGGTC ACCGGCGCCC TGGCCGGGGT CTACACCGGC
CTGACGCCGC TGATGACGAT CCCGGTGGCC TGGCTGCTGC TGCGCGAGCG CCCCACGGCC
GCCGAGGTCG GCGCCACCGT CATCGGCTTC GCCGGGCTCG CCGTCGTCCT CGCCCCCTGG
AGCGGCGGCG AGCGGGCGCC GCTGAGCGGC CAGCTGCTGT GCCTGGCGGG GGCGACCTGC
TACGCGCTCG CCTACAGCTA CGCCGGCCGG CTGATGAGGA CGCTCCCCGA CGGCAAGCTC
TCCCTGGCCG CCGCCCAGGC GCTGGCCGCC TCGGCGATCA TGCTTCCGGC CGGGAGCGGG
CAGCTCGCCC ACCCGGTGCG CCTGACGTGG CTGATCGCGC TCTGCCTGGT GCTGCTGGGC
GCGGGTACGG CCGTCGCCTT CCTGGTCAAC TACTGGCTGA TCGCCCGGGT CGGGCCGGTG
CGGGCGTCTC TGGCGTTCTA CCTCATCCCG GTGGTCGCGG TCGTGGCCGG GCTGGTCGCC
AGGGGCGAGC GGCTCAACCC GAACGAGGCG CTCGGCTCGG TGCTCATCCT GTCCGCCCTC
GCGGCCCTGT ACGCCTGGGA GCGCACCCGG GAGGCGGGAC CGGCGCCCGT CCCCGATCCG
GCGGAGACCC GCTGA
|
|---|
| Protein sequence | MRPADILGIG VLASVWGTNF LLVEEALEGL DPIQIVLIRL VLGAAALVLL ARARRTALPH
GGVVWLKLAG MGLLGQAVPW LLFAWGQREV TGALAGVYTG LTPLMTIPVA WLLLRERPTA
AEVGATVIGF AGLAVVLAPW SGGERAPLSG QLLCLAGATC YALAYSYAGR LMRTLPDGKL
SLAAAQALAA SAIMLPAGSG QLAHPVRLTW LIALCLVLLG AGTAVAFLVN YWLIARVGPV
RASLAFYLIP VVAVVAGLVA RGERLNPNEA LGSVLILSAL AALYAWERTR EAGPAPVPDP
AETR
|
|---|
| |