Gene Sros_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2501 
Symbol 
ID8665787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2729001 
End bp2730623 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_003338220 
Protein GI271964024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.137553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC TCTCCCCTGA CCTGGTCGGC GACTATCTCG ACTGGTACCT CGGCGCCCAC 
CCCGTCCATG CCGCCCTCGC GGGCGCCGAG GGTTACGACA GGACCCTGGG TGACTTCACG
GAGGCGGGCA TCCGGGCCCG GGAGCGGGAG TCGAGGCGCT GGCTGGAGCG GTTCCAGGAG
GTCGGGGAGG CCGGGGGGCC CGGAGGCTTC GAGGACATGA TCGACCGTGA GCTGATCATG
TCCACGCTGC GCGGCGGGCT GGCCTACGAG GCCTGGCCCG CCTGGCGGCG CGACCCCTCC
GTCTACCTGG GGCCGATCTT CGGCTCGATG TTCAGCCCGT TCCTGCACCG GCTGTCCCCC
GAGGGTGAGC TGGTCGAGGC GGCCGTCGCG CGGCTGGCCG AGGTGCCGGA CGTCATCGCG
GCCTGCCGTA CGAACCTGGA CCCGGCGCTG GCGGCTCCGC TGCTGGTCGA GCGGGGCCTG
GGCCAGGCGC GGACGGCCCG GCGCTTCCTC ACCGAGACGG TCCCCGGCCT GGTCGCGGAC
GAGGCCCTGC GCGCCCGGCT GGCCGCGGCG GCCGAGCCCG CGGCGGCGGC CTTCGACGGG
CTCGTGGAGT TCCTCGAGGG CTTCCAGGCC ACCGGCACCT GGCGGATGGG CGAGGAGCTG
TACTCCACGC TGCTGCGCGA GCGGGAGATG CTCGGCTACG GAGCCGACGA GCTGCTCAAG
CGCGGCCAGG AGGCCTACGA CGACCTGGAC GCCCGGATGC GCGAGGTCGC CCGGCGGCTG
CCCGGCGGCT CCGACGACTG GCACGCGGCC GTGATCGGGC TCCAGGACGA CCACGCGCCG
ACCCTGGAGG ACATGCGGGC CGAGTACGAC GCCGAGACCG AGCGGGCCAG GAGGTTCGTG
CGCGAGCACG GTCTGGTGAC GTTCGCCGAC GGCGAGGAGT GCCGGGTGGT GCCGTCGCCG
GAGTTCCAGC GGCCCATCCT CGCCGTCGCC TCCTACCTGC AGCCCCCGCC CCTGTCCGCC
TCGCGGATCG GGCACTTCTT CGTGCCGTTC ACCCCCGACT CCTTCACCGG GGAGCAGGTG
CGCCAGCGGC TGCGCACCAA CGCCAGGGCC CAGATGCCCT CCATCGCCGT CCACGAGGCC
TACCCCGGCC ACCACTGGCA CCTGTCCTGG ATGGCGGGCA ACCCGAGCCG GACCCGCAAG
CTGTTCCGCA CGCCGTACTT CTCCGAGGGC TGGGCCCTGT ACGTCGAGAA GGTCATGCGC
GAGCAGGGCT ACTTCACCAC CCCCGCCCAG GAGCTCGCCC ACCTGGACTT CCGCCTCTTC
CGGGCGGCCC GCATCATCGT GGACGTCTCG CTGCACTGCG GTGACATGAG CGTCGAGGAG
GCGGAGGAGT TCATGACCAC CAAGTCCTCG CTCACCCCCG GCACGGCCAA GGGCGAGGTC
AACCGCTACT GCGCCTGGCC CACCCAGGCC CCCTCCTACC TGACCGGCGC CCTGGAGATC
GACCGCATCC GCGACGACTA CCTGGCCGCG GGCCGCGGTG ACCTGCGCAC CTTCCACGAC
ACCCTGGCGG GATCCGGCGG CCTCCCCCTG GGGCTGGCCC GCCGGGTGGC TCTGGAAGGC
TAG
 
Protein sequence
MTDLSPDLVG DYLDWYLGAH PVHAALAGAE GYDRTLGDFT EAGIRARERE SRRWLERFQE 
VGEAGGPGGF EDMIDRELIM STLRGGLAYE AWPAWRRDPS VYLGPIFGSM FSPFLHRLSP
EGELVEAAVA RLAEVPDVIA ACRTNLDPAL AAPLLVERGL GQARTARRFL TETVPGLVAD
EALRARLAAA AEPAAAAFDG LVEFLEGFQA TGTWRMGEEL YSTLLREREM LGYGADELLK
RGQEAYDDLD ARMREVARRL PGGSDDWHAA VIGLQDDHAP TLEDMRAEYD AETERARRFV
REHGLVTFAD GEECRVVPSP EFQRPILAVA SYLQPPPLSA SRIGHFFVPF TPDSFTGEQV
RQRLRTNARA QMPSIAVHEA YPGHHWHLSW MAGNPSRTRK LFRTPYFSEG WALYVEKVMR
EQGYFTTPAQ ELAHLDFRLF RAARIIVDVS LHCGDMSVEE AEEFMTTKSS LTPGTAKGEV
NRYCAWPTQA PSYLTGALEI DRIRDDYLAA GRGDLRTFHD TLAGSGGLPL GLARRVALEG