Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2488 |
Symbol | |
ID | 8665774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2714143 |
End bp | 2715222 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | LuxR family transcriptional regulator |
Protein accession | YP_003338207 |
Protein GI | 271964011 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.008035 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTCACC CGCACCACCG CACCGAGATC CTGTCGGCTG CCGATCGGGC CGACAACGCG CTGGACCTCT TCAGCCGCGC CTCGGCCAGG CTGCGGCGGC AGATGCCGTT CGACTCCGCC GTATGGGCGG CCACCGACCC TGAAACGGGC CTGGTCACCG CACCCATGCT GGTGGAGAAC CTCGGCTCCG GCGAAGGGTG CGCCGACTAC TGGGAGAGCG AGCTCCTGGA GGAGAACGTC CTGCCGTTCC GTGACCTCGC CCGCGCCGCC GTCCCCGTGG CCGGCCTGCG CGCGGCCACT GGCGACCTGC CCGAGCGCAG CGCCCGCTTC CGCCGTCTGC TCGGCGGTCA GGGCGTGGAC GACGAGTTGC GGGCCGTGCT GCGGAGCGGC GACCGGCCGT GGGGCGTGGT GAGCCTTTTC CGCATGCGGG GAGGCCCGGC GTTCGGCCCG CACGAGGTCG CGCTGTTCGC CGACCTGTCC GCTCCGCTCG CCGACCGGCT GCGCCGTTTC GCCCGTCCGT CCGAATCAGC CGGCGGACCG GGCGCCTCCG CACCCGGCCT GCTGCTCTTC GACGAGTACG GCGAGGCGAC GTCGATCAAC GAGGAGGCTC GGCGGTATCT CGCGCTGCTG CCGGACGGAC CGTCCATTCC GTCGACGCTC GGGCTGAGGC TGCCCATCTG GTTGATCGGC ACGGCGCTGC AGGCGCGGGC CATCGCCCGA GGTCGCGATC GCGGCAGCGC CCGGATCCGC ATCCGGACCC GCGACAGGCA GTGGCTGACC TGCCACGCCT CATGGCTGAG CGGTCCCGGT GGGCGGCCGG GGCCGATCGC GCTCGTCATC GAGCCCGCCG CCCCCGGCGA CCTGGCGGCC ATGGTCGCCC AGGCATACGG CCTGACGCCG CGCGAGTTCC AGGTCGCTCA GCTCGTGGCA CAGGGCCTGC CCACCACAGA GATCGCAGCG GCCCTGTTCA TCTCCCCGCA CACCGTCCGC GGCCACCTCA AGGCCGTCTT CGGCAAGGCG GAGATCTCCA GCCGTGGTGA GCTCGTCGGA CGGCTGTTTG CCGAACCCCG CAGGCCGTAG
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Protein sequence | MIHPHHRTEI LSAADRADNA LDLFSRASAR LRRQMPFDSA VWAATDPETG LVTAPMLVEN LGSGEGCADY WESELLEENV LPFRDLARAA VPVAGLRAAT GDLPERSARF RRLLGGQGVD DELRAVLRSG DRPWGVVSLF RMRGGPAFGP HEVALFADLS APLADRLRRF ARPSESAGGP GASAPGLLLF DEYGEATSIN EEARRYLALL PDGPSIPSTL GLRLPIWLIG TALQARAIAR GRDRGSARIR IRTRDRQWLT CHASWLSGPG GRPGPIALVI EPAAPGDLAA MVAQAYGLTP REFQVAQLVA QGLPTTEIAA ALFISPHTVR GHLKAVFGKA EISSRGELVG RLFAEPRRP
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