| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2443 |
|---|
| Symbol | |
|---|
| ID | 8665729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2667013 |
|---|
| End bp | 2667729 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003338164 |
|---|
| Protein GI | 271963968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00201258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0194223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAC CATCGAAGGA TCGGCTGGCC GATCTCGACC CCTTCGACAT CTTCGACACC
GAGGCGGCCC GCCTGGACCG TTACTTCTCC CGGCTCGACG ACGAGGGCTG GCGGCGCCCC
TCGCGGTGCG CGGGCTGGTC GGTGCGCGAC GTCCTGGGGC ACCTGGCCGG CGAGGAGCTC
TACAACCACG CCTGCCTGGA CGGCGACGTC CCGGGTTTCT CCGCGATGCT CGGACGCGAG
GGCGTCACCG GCGGCTTCGA CGGCTTCAAC GACTGGTGCG TACGGCGCGG CCGCGGCATG
CCCGTCGAGG AGGTGCTCCA GGAGTGGCGG CGCGCGAACG GCGAGACGCG CGAGCGCATG
CGCTCGCTCG GCCGCGACGC GGAACTGCCG ACCATGGCCG GGCCGTACCC GGTGGGCCTG
CAGACCTTCC ACTACGACTC CGAGTACGCC ACGCACGCCG ACGACGTGGG AGCTCCCATG
GCGGACGACG AGGCCGACGG ACGGGCCCGG TGGCGGGCCG AGGTGGCGAG CTTCGTGCTG
GGGGAGCAGG GCTCGGAGGC GCAGGTCGAG CTGACCGCCG AACGGGTCTG GGTGCACGCG
GCCGGTATGA GCGCGCAACT GCCCGTCTCC GTGTTCGTCG AGGCGACGGT CGGCCGGCTG
CCGGACGACC ACCCGATCGA CCGCAGGCTC AGGGCGGTCC TGCGCTGCCT GGCCTGA
|
|---|
| Protein sequence | MTSPSKDRLA DLDPFDIFDT EAARLDRYFS RLDDEGWRRP SRCAGWSVRD VLGHLAGEEL
YNHACLDGDV PGFSAMLGRE GVTGGFDGFN DWCVRRGRGM PVEEVLQEWR RANGETRERM
RSLGRDAELP TMAGPYPVGL QTFHYDSEYA THADDVGAPM ADDEADGRAR WRAEVASFVL
GEQGSEAQVE LTAERVWVHA AGMSAQLPVS VFVEATVGRL PDDHPIDRRL RAVLRCLA
|
|---|
| |