| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2399 |
|---|
| Symbol | |
|---|
| ID | 8665685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2593897 |
|---|
| End bp | 2595003 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | leucine rich repeat protein |
|---|
| Protein accession | YP_003338121 |
|---|
| Protein GI | 271963925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.502023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGCCG AGCCCCACGA CCTTGACGCG TTGCTCGCGT GGTTGCGCGC CGGGCGGCCG
GCGACCCGCC GCACCGATTT CGCGGTGGGT ACGGCGATGC CCGACGGGCG CCTCGACCTG
TGCAAGCAGG CACTGGGAGC ACGTGGCGCC GAGCTGATCG CGGAAGCATT GCCCCACGGC
GGGCCGATGC GTCATCTGCT GCTGGGCACC GACGGGCTGG GCGATGCGGG GGCGGACACG
GTCGCGGAGG CGGCCACGGC CTCCGGAGCC TCGACTCTCT ACCTCGGCTG CAATGGCGTC
ACCGCGGCCG GCGCGTGCCT GATCGCCGAC CGCCTGACCG CCTCACCCGG TGTCGTCCGT
GGCCTCTGGC TCAAGCGCAA CCCGCTCGGA CCCGACGGCG GTCGCATCGT CGCCGAGGCC
GTCGGTGCCG GATTGACCAC GGTCGACCTG GTCCAGACAG GCCTGGACGC GGGCGGGCTC
GCGACATTCG TCGACCGTGT GCTGTCCGCC GGAGGCATCG GGCGGCTGTT CGTGAGCGGC
AACCCTCTCG GACCGGCGGG CGCCGAGGAG CTGGCGAGGC TGATCTCCGC AGCCGGGCTT
GAGGAGCTCT ACGTGTCAGC GGCAGACCTT GGAGATCAAG GTGCCGTGAA CCTGGCGAAG
GCCGTACGGG CCGGACGTCT GCGCCGATTG TCGGTGGCGA GCAACGGCAT CGGATCCGCC
GCCGCCGTCG AGCTGGTCGC CGCCGCGGTG GCGGCGGGGG TCGAGGTGCT CGACCTGGGC
CGGGTCCGTG CCGCCGGGGT CCTCGGTGCC TCGGACAACC ATCTCGGGGA CGGAGGTGTG
GCATCCGTCG CCCAGGTGCT GGCCGGTTCC CCGCACCGGC TGGGACACCT GGATCTCGGG
CACACGGGGA TCGGCAGCAG GGGTGCGCTC CGCTTGCTCG CCGAGGCCCA GCGGGCTCCG
TCGCCGACCC GGTTCATCCT GAGTCAGGGC ATCGCGTCCA GGATCAAACG CGAGCTGGGG
CGCCTGGCGG CAGCCGTACC GGAACTCCGG CCACATCCCG AGATCGCCGC GGTCCGGAGC
GTGCACCGGA CCGCTCGCCG GACATAG
|
|---|
| Protein sequence | MVAEPHDLDA LLAWLRAGRP ATRRTDFAVG TAMPDGRLDL CKQALGARGA ELIAEALPHG
GPMRHLLLGT DGLGDAGADT VAEAATASGA STLYLGCNGV TAAGACLIAD RLTASPGVVR
GLWLKRNPLG PDGGRIVAEA VGAGLTTVDL VQTGLDAGGL ATFVDRVLSA GGIGRLFVSG
NPLGPAGAEE LARLISAAGL EELYVSAADL GDQGAVNLAK AVRAGRLRRL SVASNGIGSA
AAVELVAAAV AAGVEVLDLG RVRAAGVLGA SDNHLGDGGV ASVAQVLAGS PHRLGHLDLG
HTGIGSRGAL RLLAEAQRAP SPTRFILSQG IASRIKRELG RLAAAVPELR PHPEIAAVRS
VHRTARRT
|
|---|
| |