| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2279 |
|---|
| Symbol | |
|---|
| ID | 8665561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 2465395 |
|---|
| End bp | 2466300 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003338003 |
|---|
| Protein GI | 271963807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0136903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.215844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCC CCCGTCTCGC CCTCGTCGCC GCCACCGCCC TCGCCCCCAC GGTCTGGGGC
ACCACCTACA TCGTGACCAC CGAGCTGCTG CCCCCGGACC GCCCGCTGCT GACCGCCCTG
CTCCGCGCCC TCCCCGCCGG CCTGCTCCTG CTCGCCATGA CGCGGACGCT CCCCAGGGGA
AACTGGTGGT GGCGGGCGCC GGTGCTGGGC GCGCTGAACA TCGGCCTGTT CTTCCCCCTG
CTCTTCCTGT CCGCCTACCG GCTCCCCGGC GGCGTGGCGG GAGTCCTCGG CGCCATCCAG
CCGCTCCTCG TCGCCGGATT CACCCGCGCC GTACTGCGCG AGACCGTCCC GGTCCACCGG
GTGATCGCCG GGATCACGGC GACGGTCGGC GTCTCCCTCG TCGTGCTCCG GGCCAATGCC
GCCCTCGACG CCGTCGGCGT CGCCGCGGGC GTCGTCGCCG CGGCGGGCAT GGCCGCCGGG
GTCGTCCTCA CCCGCTCCTG GGGGAAGCCG CCGGGCGTGA GCGATCTGGC CCTCACCGGC
TGGCAGCTCA CCGCGGGCGG CCTGATGATC GCTCCCGTGG CCCTCGCCGC CGAAGGCATG
CCGCCCGCCC TGGACGGAGC CGCCGTCGGC GGCTACCTCT GGCTGGGCCT CGTCGGCACC
GCCGCCGCCT ACACCCTGTG GTTCCGCGGC ATCGCCCGGC TGCCGGCCGC CCAGGTGTCC
CTGCTCGGCA CCCTCAGCCC GCTCACGGCG GCACTGCTCG GCTGGATCGC CCTCGGCCAG
TCCTTGAGCC CGCTTCAGCT CACCGGCTTC GCGCTGGCCC TCGGCGCGAC CGTCCTCGGC
CAGTTCCCCG CGCCCCGGCG CACCCGCGTC GCCGCGGACC CGCAACCCGC CCCTTCGCGC
CCGTAG
|
|---|
| Protein sequence | MPAPRLALVA ATALAPTVWG TTYIVTTELL PPDRPLLTAL LRALPAGLLL LAMTRTLPRG
NWWWRAPVLG ALNIGLFFPL LFLSAYRLPG GVAGVLGAIQ PLLVAGFTRA VLRETVPVHR
VIAGITATVG VSLVVLRANA ALDAVGVAAG VVAAAGMAAG VVLTRSWGKP PGVSDLALTG
WQLTAGGLMI APVALAAEGM PPALDGAAVG GYLWLGLVGT AAAYTLWFRG IARLPAAQVS
LLGTLSPLTA ALLGWIALGQ SLSPLQLTGF ALALGATVLG QFPAPRRTRV AADPQPAPSR
P
|
|---|
| |