| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2211 |
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| Symbol | |
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| ID | 8665493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 2388318 |
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| End bp | 2393180 |
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| Gene Length | 4863 bp |
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| Protein Length | 1620 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | putative ATP-dependent helicase Lhr |
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| Protein accession | YP_003337937 |
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| Protein GI | 271963741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.961951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTATG GAGCCGTGAC CGGATCAGCG CTCGACCACT TCACCCCTGT GACCAGGGAC
TGGTTCACCG GAGCCTTTGC CTCGCCCACC GCCGCCCAGG AGGGCGCGTG GGCGTCGATC
GCCCGGGGGG ACAACACCCT CGTGGTCGCG CCGACCGGCT CCGGCAAGAC GCTGGCCGCG
TTCCTGTGGT CGCTCGACCG GCTGGCCGCC GAGCGCGCGG CCGCGACGGG CGGGCCCGCC
GAGGACGCCG CGGGCGGGCG GAGGCGCTCA CGCGAGGACG ACGCGCCCGC CGGGCAGTGC
CGGGTGCTCT ACGTGTCGCC GCTCAAGGCC CTGGCGGTGG ACGTCGAGCG CAACCTCCGG
GCGCCGCTGG CCGGAATGCG GCAGACCGCG CGGCGGCTCG GGCTCGCGGT GCCGGAGATC
TCGGTGGCGA TCCGGTCCGG TGACACCTCG CCGCAGGAGC GGCGCCGGTT CGCGGCCAGG
CCGTCGGACA TCCTCATCAC GACCCCAGAG TCACTGTTCC TGCTGCTGAC CAGCCAGGCC
CGCGAGGCGC TGCGGGGCGT GGAGACGGTC ATCGTCGACG AGGTGCACGC CGTGGCGGCC
ACCAAGCGCG GCGCGCACCT GGCCCTCAGC CTGGAGCGGC TCGACGCCCT GCTCCCCCAG
CCCGCGCAGC GGATCGGCCT GTCGGCGACG GTGCGGCCGG TGAACGAGGT GGCCGCCTTC
CTCGGCGGCC CCCGCCCGGC GGCGGTGATC CAGCCGCCCT CGGAGAAGAC GATCGAGGTC
AAGGTGGTCG TCCCGATCGA GGACATGACG GAGCTCGACA GCGCTCCGCG CCCCTCCCGG
CCCGATGACG ACGACCAGTG GCTGCTGGAG CCCCCGGCCC GGCGGTCCAT CTGGCCGCAT
GTGGAGGAGC GGCTGTTCGA CCTGATCGAG GAGCACAGCT CGACGATCGT GTTCGCCAAC
TCCCGGCGGC TGGCCGAGCG GCTGTGCACC CGTCTCAACG AGCTGGCGTG GGAGCGCAGG
GCCGGAGAGG CGGAGCCGCC GGAGCCTTCG GAGCCGGCGC ACTGGGCCGG GGGCTTCCCC
GCGCCGCCGG CGTCCCTGTC CACCCCGGCG GCGATGATGG CGCAGGCCGG GGCCGCCAAG
GGGACGGTCC CGGAGATCGT GCGGGCCCAC CACGGGTCGG TGTCGAAGGA GGAGCGCTCC
CAGATCGAGG AGGCGCTCAA GTCCGGGAGG CTGCCGGCGG TGGTCGCGAC CTCCAGCCTG
GAACTCGGCA TCGACATGGG CGCGGTGGAC CTGGTCGCCT GCGTGGAGTC ACCGCCGAGC
GTGGCCAGCG GCCTGCAGCG GATCGGCCGG GCCGGCCACC AGGTGGGAGC CGTCTCACGG
GGTGTGATCT TCCCCAAATA CCGCGGCGAC CTGGTCCAGA CGGCCGTGGT GGCCGAGCGG
ATGAAGAGCG GCGAGATCGA GGAGCTCCGC TACCCGCGCA ACCCGCTCGA CGTGCTCGCC
CAGCAGATCG TGGCGATGAC CGCGCTGGAC GAGTGGACGG TGGACGACCT GGAGACCCTC
GTACGGCGTG CCGCGCCGTA CCGGACGCTG CCCCGCGGCG CCCTGGAGGC GACGCTCGAC
ATGCTCGCCG GGCGCTACCC GAGCGAGGAG TTCGCCGAGC TGCGCCCGCG CGTCGTGTGG
GACCGGGTCA CCGGCACCCT GCGGGGGCGG CCCGGGGCCC AGCGGCTGGC CGTGACCAAC
GGCGGCACGA TCCCCGACCG GGGGCTGTTC GGCGTCTTCC TGGTCGGGGA GAAGGCCTCG
CGGGTGGGCG AGCTGGACGA GGAGATGGTC TACGAGTCCC GGGCGGGGGA CGTGTTCGTG
CTGGGCGCGA CCTCCTGGCG GATCGAGGAC ATCACGGCCG ACCGGGTGCT GGTCTCCCCC
GCCCCCGGGC AGCCGGGCAA GCTGCCCTTC TGGCACGGCG ACAACGCGGG GCGCCCGGCG
GAGCTGGGCA GGGCGATCGG CGCGTTCCTG CGCGAGATGT CCGGCGCCGG CTCCGGCGCC
GGGCCGGGAT CCGGCAGGAA GGGGGGCCTC GCGCGGGACG CCGCCAGGCC GGGCTCGGCG
GAGCCGGGCG ATCCGGCGGG GGACGGCACG CGGCCCGGCC CCGGGCGGGA GGACCCGGCC
CGGGACGGCG GGAAGCCCGG CTCCGCAGGA CAGGATGACC CGGCGCGGGA CGGCGCCATG
GAAAGGATCA GGGCGGCGGG GCTCGACGAG TTCGCCGCGG CCAACCTGCT CTCCTATCTG
GCCGAGCAGC GGCAGGCGAC CGGATACGTG CCGGACGACC GGACGCTGCT GGTCGAACGG
TTCCACGACG AGCTGGGCGA CTGGCGGGTC GTGGTGCACT CGCCGTACGG GGCGCGGGTG
CACGCGCCAT GGGCCCTGGC GATCGGCCGG CGGCTGCGGG AGCGCTACGG CGTCGACGTC
CAGGCCGTGC ACTCCGACGA CGGGATCGTG CTGCGCATCC CCGACACGCT CTCCGGTCCC
CCGTCGGACG TCGCGGTCTT CGACGCCGAG GAGATCGAGC AGATCGTCAC CGAGGAGCTC
GGCGGCTCGG CGCTGTTCGC GGCGCGCTTC CGGGAGTGCG CGGGACGGTC CCTGCTGCTG
CCGCGCCGTA CCCCCGGCAA GCGCACCCCG CTGTGGCAGC AGCGGCAGCG GGCCTCGCAC
CTGCTCAACG TGGCCGGCCG GTACGGCTCG TTCCCGGTCG TGCTGGAGAC GATGCGCGAG
TGCCTGCAGG ACGTGTTCGA CGTGCCGGGG CTGATCCGGC TCATGCGGGA CATCTCGGCG
CGGCGCGTGC GGCTGGTCGA GGTCGAGACC TCCCAGGCGT CGCCGTTCGC GGCGTCGCTG
CTGTTCAACT ACGTCGGCGC GTTCATGTAC GAGGGGGACG CCCCCCTGGC CGAGCGCCGC
GCCCAGGCGC TCGCGCTCGA CACCAGCCTG CTGGCCGAGC TGCTGGGCCA GGCGGACCTG
CGCGAGCTGC TCGACCCCGA CGTGATCGCC GACACCGAGC GCGAGCTGGC CCGGCTGGAC
CGGCCGCTCC GCGACGCCGA GGACCTCGCC GACCTGCTCC GTTCGCACGG CCCCCTGCTC
GCGGCCGACG TGAGCCTGCG CGAGGGGGAT CCGGCCTGGC TGACCGGTCT GGAGAGCGCC
CGGCGGGCGA TCCGGGTGCG GGTGGCCGGG CAGGAGCAGT GGGCGGCCAT CGAGGACGCC
GCCCGGCTGC GCGACGCGCT CGGCGTACCG CTGCCGGTGG GAGTGCCGCA CACCTTCCTG
GAGCCGGTGG ACGACCCGCT GGGCGACCTG GTCGCCAGGC ACGCCCGCAC GCGCACCCCG
TTCCCGGCGA GTACGGCCGC CGCCAGGTTC GGGCTCGGCC CGGCCGTCGT CACCGACACG
CTGCGCCGCC TGGCCGTCTC GGGCCGGGTG GTGAGCGGGG AGTTCAGGCC GGGCGGCCGG
GGAGAGGAGT GGTGCGACGC CGGGGTGCTG CGGATGCTTC GCCGCAGGTC CCTGGCCCGG
CTCCGCAAGG AGGTGGAGCC GGTCTCCCCC GAGACCCTCG CCGTCTTCGC CCCCGCCTGG
CACGGCATCA GCGGCGCCCC GCAGAGGGGC AGGCCGCCGA TCGACGCGCT GGTGAGCGCG
GTCGAGCAGT TGCAGGGCGC GGCGGTGCCG GCGTCGGCGC TGGAGACGTT GGTCCTGCCC
TCGCGGGTCC CCGGATACGA CCCGTCGCTG CTGGACGAGC TGACCTCCTC GGGCGAGGTC
CTCTGGGCCG GGCAGGGGTC CCTGCCGGGT GGGGACGGCT GGGTGGCGCT GTATTTCGCC
GACACCGCCC CCCTGCTGAT GCCCGATCCG GTCGAGATCA CCATGACCCC GCTGCACGAG
GCGGTCCTTG AGGTGCTCAG CGGTGGAGGG GCGCTGTTCT TCCGCGAGCT GGCGGGCCGT
GTCGGATCCC TCATGGCCGG TCCGGTCCCG GACGACGGGA TGCTGACCGC CGCGGTGTGG
GACCTGGTGT GGGCCGGCCG GATCACCGGC GACACGCTCG CCCCGCTGCG GGCCACGCTC
GGCACCGGCC GACCCGCCCA CCGCCCGGCC ACGACGCGCA GGCGGCGGCC GGTGCTGCCC
ACCCGGAGCG GGCCACCGAC CGTGGGCGGT CGCTGGTGGC TGCTGCCCGG GGTCGCGGAC
GACCCGACCC AGCGGGCGCA CGCCCAGGCC GAGGCACTGC TGGAGCGGCA CGGCGTGGTG
ACGCGGGGCG CGGTCGCCGC CGAACGCCTG CCCGGCGGAT TCGCCGCGGT CTACCAGGTG
CTCCGCGCCT TCGAGGAGAG CGGCCGATGC CGCCGGGGCT ATTTCGTCGA GGGGCTGGGC
GGTGCACAGT TCGCCCTCCC CGGAGCCGTC GACCGCATGC GCGCCGCCGC CACGCCACCG
CGGTCCGAGG CGCCCGGCCC CGACCCGTGG AGCTCCCGGA GGCCGGAGGG GAACGGCCGG
CGCGCGGTGG TGCTGGCGGC GGCCGATCCG GCCAACCCGT ACGGCGCGGC GCTGCCCTGG
CCCGCCCATC CCGGAGAGAT CTCCCACAAG CCGGGCCGGA AGGCGGGATC GCTGGTGGTG
CTCGTGGACG GGCACCTGGT GCTCTATGTC GAGCGTGGCG GCAAGACCCT GCTGTCGTTC
ACCGACGACG ACCGCCTCCA GCCCGCCGTG GACGCCCTGG CCCTGGCCGT GCGCGACGGC
GCCCTCGGCA AGCTGACCGT GGAGCGCGCG GACGGCACCG CCATCAACGA CTCCCCCCTG
GGCGCCGCCC TGGAGGCCGC CGGTTTCCAC CCGACCCCGA GAGGCCTGCG CCTACGGGCC
TAG
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| Protein sequence | MHYGAVTGSA LDHFTPVTRD WFTGAFASPT AAQEGAWASI ARGDNTLVVA PTGSGKTLAA
FLWSLDRLAA ERAAATGGPA EDAAGGRRRS REDDAPAGQC RVLYVSPLKA LAVDVERNLR
APLAGMRQTA RRLGLAVPEI SVAIRSGDTS PQERRRFAAR PSDILITTPE SLFLLLTSQA
REALRGVETV IVDEVHAVAA TKRGAHLALS LERLDALLPQ PAQRIGLSAT VRPVNEVAAF
LGGPRPAAVI QPPSEKTIEV KVVVPIEDMT ELDSAPRPSR PDDDDQWLLE PPARRSIWPH
VEERLFDLIE EHSSTIVFAN SRRLAERLCT RLNELAWERR AGEAEPPEPS EPAHWAGGFP
APPASLSTPA AMMAQAGAAK GTVPEIVRAH HGSVSKEERS QIEEALKSGR LPAVVATSSL
ELGIDMGAVD LVACVESPPS VASGLQRIGR AGHQVGAVSR GVIFPKYRGD LVQTAVVAER
MKSGEIEELR YPRNPLDVLA QQIVAMTALD EWTVDDLETL VRRAAPYRTL PRGALEATLD
MLAGRYPSEE FAELRPRVVW DRVTGTLRGR PGAQRLAVTN GGTIPDRGLF GVFLVGEKAS
RVGELDEEMV YESRAGDVFV LGATSWRIED ITADRVLVSP APGQPGKLPF WHGDNAGRPA
ELGRAIGAFL REMSGAGSGA GPGSGRKGGL ARDAARPGSA EPGDPAGDGT RPGPGREDPA
RDGGKPGSAG QDDPARDGAM ERIRAAGLDE FAAANLLSYL AEQRQATGYV PDDRTLLVER
FHDELGDWRV VVHSPYGARV HAPWALAIGR RLRERYGVDV QAVHSDDGIV LRIPDTLSGP
PSDVAVFDAE EIEQIVTEEL GGSALFAARF RECAGRSLLL PRRTPGKRTP LWQQRQRASH
LLNVAGRYGS FPVVLETMRE CLQDVFDVPG LIRLMRDISA RRVRLVEVET SQASPFAASL
LFNYVGAFMY EGDAPLAERR AQALALDTSL LAELLGQADL RELLDPDVIA DTERELARLD
RPLRDAEDLA DLLRSHGPLL AADVSLREGD PAWLTGLESA RRAIRVRVAG QEQWAAIEDA
ARLRDALGVP LPVGVPHTFL EPVDDPLGDL VARHARTRTP FPASTAAARF GLGPAVVTDT
LRRLAVSGRV VSGEFRPGGR GEEWCDAGVL RMLRRRSLAR LRKEVEPVSP ETLAVFAPAW
HGISGAPQRG RPPIDALVSA VEQLQGAAVP ASALETLVLP SRVPGYDPSL LDELTSSGEV
LWAGQGSLPG GDGWVALYFA DTAPLLMPDP VEITMTPLHE AVLEVLSGGG ALFFRELAGR
VGSLMAGPVP DDGMLTAAVW DLVWAGRITG DTLAPLRATL GTGRPAHRPA TTRRRRPVLP
TRSGPPTVGG RWWLLPGVAD DPTQRAHAQA EALLERHGVV TRGAVAAERL PGGFAAVYQV
LRAFEESGRC RRGYFVEGLG GAQFALPGAV DRMRAAATPP RSEAPGPDPW SSRRPEGNGR
RAVVLAAADP ANPYGAALPW PAHPGEISHK PGRKAGSLVV LVDGHLVLYV ERGGKTLLSF
TDDDRLQPAV DALALAVRDG ALGKLTVERA DGTAINDSPL GAALEAAGFH PTPRGLRLRA
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