Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2082 |
Symbol | |
ID | 8665364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2235681 |
End bp | 2237498 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter, binding protein component |
Protein accession | YP_003337810 |
Protein GI | 271963614 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.645423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGAA TGGGCGCGCG GCTGGCTGCG CTTGGACTGA CGCTGCTGCT GGCGATACTC CCGGAGACGC AGGCACTGGC CAGACAGGCG CCCGAACCGG GGAAGAAGAC CGTGCGGCTG GGCGTGACCC AGGCCGTCGA CTCGATGAAC CCGTTCCTGG CGGTCCGGAT AGTCTCCTCG TCGATCCACC GCTGGACGTA CGGGTCCCTC ACCGTCCCCG ACCCCAAGAC CCTGCAGCCC AGCCCCGACC TCGCCGAGTC ATGGGAGACG TCGGACGACA AGCTGACCTG GACCTTCAAG ATCCGCGCCG GCGCCAAGTG GTCGGACGGC AAGCCCGTCA CCGCCCAGGA CGCGGCGTGG ACCTTCAACA CGGTCATGAC CGTCGACGCG GCCAAGCAGG CCAACGGCCC GGCGGTGGAG AACTTCGAGA GCGTCACGGC GACCGACGAC CGGACCCTGG TCATCAAGAC CAGGAAGCCG CAGGCCTCGA TGCTGGAGAA CCCCATCCCG ATCGTGCCCA AGCACGTCTG GGAGGCCGTC GGCGACATCG GCAAGTTCGA GAACGACACG TATCCGGCCG TCGGCAGCGG CCCGTACATC GCGGTCGAAC ACAAGAAGGA CGCCTACGTC AAGCTGAAGG CCAACCCCGG CTACTGGCGC GGCGCCCCCA AGATCGACGA GCTGCACGTC ATCTTCTACG AGAACCCCGA GGCCGCCAAC GCGGGCCTGA AGAAGGGCGA CATCGACCTG ATCGGCCGCC TGGCCGCTCC CCAGTTCGAG GCTCTGGCGG GCGACCCGAA CATCGTGCAG TGGAACACCC AGGGGCGCAG GGCCGCCTAC CTGCAGCTCA ACCACGGCGC GCAGACGATC GACAACAAGC CGGTCGGCGA CGGGCACCCC GCGCTGAAGG ACCCGAAGGT GCGCCGGGCC ATCCACTACG CGATCGACAA GAAGGCCCTG GCCGACCAGG TGGTGAACGG TCTCGCCGTG CCGGCTGACG GGTCGATCGT CCCGCCGATG TACCAGGAGT TCTTCTGGAA GGCCGAGGGC GACGACCTCG TCACCCACGA CGTCGCCAAG GCCAACGAGA TCCTCGACGA CGCCGGCTAC AAGAAGGGCG CCGACGGCAT CAGGACGATG CCCGACGGCG AGCGCAAGCT GGAGATGCGC TTCAGCATCC ACACGGACAC GCCCGTCGAG GACAAGCTCG GGCAGTTCCT GACCGGCTGG TTCAAGGAGA TCGGCATCGC GCTCTCGACC AGGAAGCTCG ACGCCAACAA GTTCACCGAG GAGACCGGCT TCACCGGCCT GTTCGACATC GCGATCAGCG GCTGGTCGGT CAACCCCGAC CCCGAGGAGG TCCTGGCCAC CCACCTGTGC AGCCGCAGGC CCACGCCGAG CGGCGAGGGC GGCGGCACCG AGTCGTTCTA CTGCGACCCG GCGTACGAGA AGCTCTACCA GGAGCAGCTG AGCGAGCTCG ACCGGCCCAA GCGCGCCGAG ATCATCAAGC AAATGCAGAA GCGCCTCTAC ACCGACGCCC CGGTCATCGC CCTCTACTAC CCGAACAACC TTGAGGGCTA CCGCAAGGAC CGCATCACCA GCATCACCCC GATCCCCGAG GACAAGGGCA TCCTGTACGG CGGGAGCGGC TACTGGCCCT TCTACTCCCT GGACGCGGTG GCGGCCCCGG CCGGCTCGGC CGGCGGAGGC TCCGGCACCG GCCTCGCGGT GGGCGTCGCC GCGGCCGTGG TGATCGTCGG CGCGGGCGGG TTCCTCCTGG CCAGGCGGCG TCGCTCCGTG GCGGACGAGC GCGAGTGA
|
Protein sequence | MTRMGARLAA LGLTLLLAIL PETQALARQA PEPGKKTVRL GVTQAVDSMN PFLAVRIVSS SIHRWTYGSL TVPDPKTLQP SPDLAESWET SDDKLTWTFK IRAGAKWSDG KPVTAQDAAW TFNTVMTVDA AKQANGPAVE NFESVTATDD RTLVIKTRKP QASMLENPIP IVPKHVWEAV GDIGKFENDT YPAVGSGPYI AVEHKKDAYV KLKANPGYWR GAPKIDELHV IFYENPEAAN AGLKKGDIDL IGRLAAPQFE ALAGDPNIVQ WNTQGRRAAY LQLNHGAQTI DNKPVGDGHP ALKDPKVRRA IHYAIDKKAL ADQVVNGLAV PADGSIVPPM YQEFFWKAEG DDLVTHDVAK ANEILDDAGY KKGADGIRTM PDGERKLEMR FSIHTDTPVE DKLGQFLTGW FKEIGIALST RKLDANKFTE ETGFTGLFDI AISGWSVNPD PEEVLATHLC SRRPTPSGEG GGTESFYCDP AYEKLYQEQL SELDRPKRAE IIKQMQKRLY TDAPVIALYY PNNLEGYRKD RITSITPIPE DKGILYGGSG YWPFYSLDAV AAPAGSAGGG SGTGLAVGVA AAVVIVGAGG FLLARRRRSV ADERE
|
| |