Gene Sros_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2078 
Symbol 
ID8665360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2229689 
End bp2232211 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337806 
Protein GI271963610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.548714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACC GCCTCAAGGT GATCGCAGCG GCCGTCATGG CCGTCGCCAT CGCCCTTCCC 
GCCGGGGCCG CTCAGGCGGA GCCCACCCCG GCCACATCCC CCGCCACCAC CTGCGACGCC
ACCCTGACCA CGCCCGTCTA CCACGGCAAG GTGCCCACGC CCAAGAGCGT GCTCGGCTTC
GACCTCGGCG AACGCGAGGT CACCACCGCG GAGTCCGACA CCCTGCTGAC CGCGATCGAC
CGGGCCAGCG ACCGGGTCAC CTCCGGCACG CTGGCCACCA GCGCCGAGGG ACGCGCGCTG
AAGTACGCGA TCGTCGGCAC CCCGCGCAAC CTCCGCAACC TGCGCGCGAT CGAGGCCTCG
ATCAAACTGC TGCGCAACCC GCTCACCCCC GCCCCCGCGG CCAGGGTCCT CGCCAGGAAC
ACGCCCGCGA TCCTCTGGGT CGCCGGAAAC GTGCACGGCG GCGAGGAGAG CGGCACCGAC
GCCGCCCTCA AGACCCTCTA CGACCTGGCC GGACGGGACG ACTGCGCGGC CGGGCGCATC
CTGGACAACG CCGTCGTGGT GATCCTGCCG ACGCAGAACC CCGACGGCCG CGAGGCCGAC
ACCCGGCGCA ACGCCTACGC CTTCGACATG AACCGGGACT GGTTCGCCCG CACCCAGCCG
GAGACCGACG GCAAGATCGA GCTCATGCGG AAGTATCCGC CGCAGCTCTT CATCGACGCC
CACGAGATGG GCGGCACCGA ATACTTCTTC CCGCCGAACG CCGACCCGGT CTACCACGAC
ATCGCCGAGC CGACCGTCGA CTGGATCAAC AACACCTACG GCGCCGCGAT GATCGGCGAG
TTCACCCGGC GCGGGATCCC GTTCTTCAAC CGCGATGTCT ACGACATGTT CTACATGGGC
TACGGCGACA CGGTCCCGAC GACCGGCTTC AACGCGGCGG GCATGACCTT CGAGAAGGGC
AACGCCTCGC CGATCGCCGC CCGGACCTTC GAGCAGTGGC TGACCCAGTG GGTCTCCCTG
TCGGCCGCGG CCGCCAAGAA GACCGAGATC CTCACCACCT GGCACGCGAT GTACGCCGAC
GCCCTGAAGC AGGGCCTCGA AGGTCGGCTG GAGCCGAACA AGGTCTACAA CCCGGGCAAC
GAGGTCATCA CCCAGGTGCC CGACCGCAAG GTACGCCACT ACTTCCTGCG CGCCGACGAC
CCGGCCAAGA AGGCGGAGAC CGACCTCGTC GTCCGCCGCC TGCAGCGCAT GGACGTCCAG
GTGTACAAGC TGGCCAGGCC GCTGACGGTC AAGGACTTCA AGGCGTACGG CAGGCCCGAG
GCGCGCACCA CCCTGCCCCG GGGCACCTAC TGGATCCCGC TGGCCCAGGG CCAGAAGCAC
TGGATCCAGG GCATGCTGAA CGAGGACACC TACACCCCGT TCCCCTACTT CTACGACGTG
ACCGCCTGGA GCCTGCCGCT GCTGGGCAAC GTCTCCGGCG GCTCCTCCGG CCAGGTGCTG
CTGCCCGCCG CGACCCCGGT CCAGCCGGTG GCCGCCCCCT CGGCCCGGCT CACCACCCCG
CGCAGGGTCG GCGTGCTGCA GATGGCGGGC GCCGCGCAGA ACGCCGGCGA GTCCAGCGGC
TGGCTCCGCC ACCGCCTGGA CCGCGACTGG AAGCTGCCCT ACGAGGTGCT CGTCCCGGCC
GACGTCGCCG CGGGCAAGCT CGGCGACGTG GACGTGCTGC TGGTGCCGGA CGGCCCGGCC
AACGCGGCCG CGACCGCCCT CGGCGAGGCG GGCCGTACCG CGCTGAAGGA CTGGGTCGGC
CGGGGCGGCC GGTACGTCGG CTGGTCGGGC GGCGCCCAGC TCGCCGCGCT GACGGGGGTC
TCCGGCGTGA CACTGGCCGA GCCCTCCTCC GACGTGCCCG GCTCGCTCCT GCGGACCACC
GTGGCCGGAG GGCCGCTGAG CGAGGGCGTC GGGTCGAGCG TCATGCAGTT CTACGCCTAC
GACCTGGTGA TGCGGGCCGC CGACCCCTCG CACGTGGTGG CGTCCTACCC GGCGGCGGAC
TCGCCCGACT GGTTCCTGTC CGGCTTCGCG CTGGGCGCCG GGGAGCTCGG CGGGACGGCG
GCCGTGGTGG ACGAGCCGGT GGGCAGCGGC CACGCGGTGC TGTTCGCCGC GGAGCCGAAC
TTCCGCGCCT TCACCGACGG CACGGCGAAG ATCGTCGCCA ACGCGATCAC CTCCGACCTG
CCCGCCACCC GGGCGCGGGC GCTCGTCCCC GTGCCCGACG CCTCCCGTGC CGCGGCGGCC
ATCCCGGACC GGGAGTCGCC GATCCGCCTC ACGGTCCCCA CCGCAGACGG GGACAAGGTC
CGCGCGGCCC TGAACGGCTT CGGGGCCACC TGGGCCGAGC AGGCCGCCAC CGGCGGCGCG
GTCCGGTTCA CCGTCGCCAA CCCCGGCGGC CTCGGCCTGC ACGAGCACCC CTGGGCGGGC
AGGCTCCCGG GCGCGCTGCG CACCGCCGGA GTGTCCCCGC TCGCGGTCGT CCTGCCGCAG
TGA
 
Protein sequence
MVNRLKVIAA AVMAVAIALP AGAAQAEPTP ATSPATTCDA TLTTPVYHGK VPTPKSVLGF 
DLGEREVTTA ESDTLLTAID RASDRVTSGT LATSAEGRAL KYAIVGTPRN LRNLRAIEAS
IKLLRNPLTP APAARVLARN TPAILWVAGN VHGGEESGTD AALKTLYDLA GRDDCAAGRI
LDNAVVVILP TQNPDGREAD TRRNAYAFDM NRDWFARTQP ETDGKIELMR KYPPQLFIDA
HEMGGTEYFF PPNADPVYHD IAEPTVDWIN NTYGAAMIGE FTRRGIPFFN RDVYDMFYMG
YGDTVPTTGF NAAGMTFEKG NASPIAARTF EQWLTQWVSL SAAAAKKTEI LTTWHAMYAD
ALKQGLEGRL EPNKVYNPGN EVITQVPDRK VRHYFLRADD PAKKAETDLV VRRLQRMDVQ
VYKLARPLTV KDFKAYGRPE ARTTLPRGTY WIPLAQGQKH WIQGMLNEDT YTPFPYFYDV
TAWSLPLLGN VSGGSSGQVL LPAATPVQPV AAPSARLTTP RRVGVLQMAG AAQNAGESSG
WLRHRLDRDW KLPYEVLVPA DVAAGKLGDV DVLLVPDGPA NAAATALGEA GRTALKDWVG
RGGRYVGWSG GAQLAALTGV SGVTLAEPSS DVPGSLLRTT VAGGPLSEGV GSSVMQFYAY
DLVMRAADPS HVVASYPAAD SPDWFLSGFA LGAGELGGTA AVVDEPVGSG HAVLFAAEPN
FRAFTDGTAK IVANAITSDL PATRARALVP VPDASRAAAA IPDRESPIRL TVPTADGDKV
RAALNGFGAT WAEQAATGGA VRFTVANPGG LGLHEHPWAG RLPGALRTAG VSPLAVVLPQ