| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2052 |
|---|
| Symbol | |
|---|
| ID | 8665334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2205875 |
|---|
| End bp | 2206600 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003337780 |
|---|
| Protein GI | 271963584 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.654374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCG AGGAAGACAA GCCACGCGAA TCCCTGTGGG AGCGCCTGGA GCGTCCAAGC
CCCACCCCGC GCCAGACCCT CTCCCCGCAG CGCATCGCCG CGGCCGCGGC CGCGGTCGCC
GACGCCGAGG GCCTGGAGGC CATCACCATG CGCCGCCTGG CCTCCGAACT GGGCGTCGCC
CCCATGGCGC CCTACCGCTA TGTGGCCGGC AAGGACGATG TCCTGGAGCT GATGGTCGAC
CACGTCTATG CCGATCTGCG CCTCCCGGAC GGTCTCGGGT GGCGCGAGAC CATGCGCGCC
CTGGCGCTGG GCACCCGCGA CCTGATGCTG CGGCACCTGT GGCTGGCTCA GCTCTCCCCG
CAGGCCAGGC TCTCGCTCAC GCCCAACAGG ATGGCCGTGG CCGAACAGGC CCTGTCGGCC
CTGGACGGCC TCGGCCTGGA CGCCGACGCG ATGATGAGCG TCTTCCGTGC CGTGGACGCC
TACGTCGCCG GCGCCTTGAA CTACGAAAGC GCCGTGCTCA ACCTCCTGCG CGAGCATGGA
TGGTCTGACG GCGGCGAGCT GCGCTCCGAA CTGGCGCCAC AGATGATCTG GCACATGCGG
ACCGGCCGCT ACCCCACCTT CCAGCGCTAT CTGCGTACCG CCACCCGCAA GGACGACACG
CAGTGGCAGT TCGAAAGCGG CCTCACCTAC GTCCTCGACG GCATCGCCGC CGAACTGGGC
ATCTGA
|
|---|
| Protein sequence | MATEEDKPRE SLWERLERPS PTPRQTLSPQ RIAAAAAAVA DAEGLEAITM RRLASELGVA
PMAPYRYVAG KDDVLELMVD HVYADLRLPD GLGWRETMRA LALGTRDLML RHLWLAQLSP
QARLSLTPNR MAVAEQALSA LDGLGLDADA MMSVFRAVDA YVAGALNYES AVLNLLREHG
WSDGGELRSE LAPQMIWHMR TGRYPTFQRY LRTATRKDDT QWQFESGLTY VLDGIAAELG
I
|
|---|
| |