Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1965 |
Symbol | |
ID | 8665247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2109015 |
End bp | 2110181 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_003337696 |
Protein GI | 271963500 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0907026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG TTGCTCTCGG TATCCCTTCC GTAAGGACCA GGCCGATCGC CGAGCGACGC AAATCCCGTC AGATCATGGT GGGCTCCGTC CCGGTGGGCG GGGACGCGCC GGTCTCCGTC CAGTCGATGA CCACCACGGT CACCGCCGAC ATCAACGCCA CGCTCCAGCA GATCGCCGCG CTGACCGCGT CGGGCTGTCA GATCGTCCGG GTGGCCGTGC CCTCCCAGGA CGACGCCGAG GCGCTGCCGA TCATCGCGAA GAAGTCGCAG ATCCCGGTGA TCGCCGACAT CCACTTCCAG CCGAAGTACG TCTTCGCCGC GATCGAGGCG GGCTGCGCGG CCGTCCGGGT CAACCCCGGC AACATCAAGA AGTTCGATGA CAAGGTCGGC GAGATCGCCC GCGCCGCCTC CGACCACGGG GTGCCCATCC GGATCGGCGT CAACGCCGGC TCGCTCGACC CCCGGCTGCT GCAGAAGTAC GGCAAGGCGA CGCCCGAGGC GCTGGTGGAG TCGGCCCTGT GGGAGTGCTC GCTCTTCGAG GAGCACGGCT TCCGCGACAT CAAGATCTCG GTCAAGCACA ACGACCCGGT CGTGATGGTC CAGGCCTACC GCCAGCTGGC CGCCCAGTGC GACTACCCGC TTCACCTCGG CGTCACCGAG GCGGGCCCGG CCTTCCAGGG CACGATCAAG TCCGCCGTCG CGTTCGGCGC GCTGCTCGCC GAGGGCATCG GCGACACCAT CCGCGTGTCG CTGTCGGCTC CGCCGGTGGA GGAGATCAAG GTCGGCATCG GCATCCTGGA GTCGCTGAAC CTGCGCGAGC GCGGCCTGGA GATCGTCTCC TGCCCGTCCT GCGGCCGCGC CCAGGTCGAC GTCTACACCC TGGCCGAGCA GGTCCAGGCG GGCCTTGAGG GGCTGAAGGT CCCGCTCCGC GTCGCGGTGA TGGGGTGCGT CGTCAACGGT CCCGGCGAGG CCCGCGAGGC CGACCTCGGC GTCGCCTCCG GCAACGGCAA GGGCCAGATC TTCGTCAAGG GAGAGGTCAT CAAGACCGTC CCCGAGTCCC AGATCGTGGA GACCCTCATC GAGGAGGCCC TGCGCCTGGC GGAGGAGATG GGGGTGGAGG TCGATCTCGA CGACGACGCT CCCGGCCCCG AGGTCGTCGT CCGCTAG
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Protein sequence | MTSVALGIPS VRTRPIAERR KSRQIMVGSV PVGGDAPVSV QSMTTTVTAD INATLQQIAA LTASGCQIVR VAVPSQDDAE ALPIIAKKSQ IPVIADIHFQ PKYVFAAIEA GCAAVRVNPG NIKKFDDKVG EIARAASDHG VPIRIGVNAG SLDPRLLQKY GKATPEALVE SALWECSLFE EHGFRDIKIS VKHNDPVVMV QAYRQLAAQC DYPLHLGVTE AGPAFQGTIK SAVAFGALLA EGIGDTIRVS LSAPPVEEIK VGIGILESLN LRERGLEIVS CPSCGRAQVD VYTLAEQVQA GLEGLKVPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESQIVETLI EEALRLAEEM GVEVDLDDDA PGPEVVVR
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