Gene Sros_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1965 
Symbol 
ID8665247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2109015 
End bp2110181 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_003337696 
Protein GI271963500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0907026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG TTGCTCTCGG TATCCCTTCC GTAAGGACCA GGCCGATCGC CGAGCGACGC 
AAATCCCGTC AGATCATGGT GGGCTCCGTC CCGGTGGGCG GGGACGCGCC GGTCTCCGTC
CAGTCGATGA CCACCACGGT CACCGCCGAC ATCAACGCCA CGCTCCAGCA GATCGCCGCG
CTGACCGCGT CGGGCTGTCA GATCGTCCGG GTGGCCGTGC CCTCCCAGGA CGACGCCGAG
GCGCTGCCGA TCATCGCGAA GAAGTCGCAG ATCCCGGTGA TCGCCGACAT CCACTTCCAG
CCGAAGTACG TCTTCGCCGC GATCGAGGCG GGCTGCGCGG CCGTCCGGGT CAACCCCGGC
AACATCAAGA AGTTCGATGA CAAGGTCGGC GAGATCGCCC GCGCCGCCTC CGACCACGGG
GTGCCCATCC GGATCGGCGT CAACGCCGGC TCGCTCGACC CCCGGCTGCT GCAGAAGTAC
GGCAAGGCGA CGCCCGAGGC GCTGGTGGAG TCGGCCCTGT GGGAGTGCTC GCTCTTCGAG
GAGCACGGCT TCCGCGACAT CAAGATCTCG GTCAAGCACA ACGACCCGGT CGTGATGGTC
CAGGCCTACC GCCAGCTGGC CGCCCAGTGC GACTACCCGC TTCACCTCGG CGTCACCGAG
GCGGGCCCGG CCTTCCAGGG CACGATCAAG TCCGCCGTCG CGTTCGGCGC GCTGCTCGCC
GAGGGCATCG GCGACACCAT CCGCGTGTCG CTGTCGGCTC CGCCGGTGGA GGAGATCAAG
GTCGGCATCG GCATCCTGGA GTCGCTGAAC CTGCGCGAGC GCGGCCTGGA GATCGTCTCC
TGCCCGTCCT GCGGCCGCGC CCAGGTCGAC GTCTACACCC TGGCCGAGCA GGTCCAGGCG
GGCCTTGAGG GGCTGAAGGT CCCGCTCCGC GTCGCGGTGA TGGGGTGCGT CGTCAACGGT
CCCGGCGAGG CCCGCGAGGC CGACCTCGGC GTCGCCTCCG GCAACGGCAA GGGCCAGATC
TTCGTCAAGG GAGAGGTCAT CAAGACCGTC CCCGAGTCCC AGATCGTGGA GACCCTCATC
GAGGAGGCCC TGCGCCTGGC GGAGGAGATG GGGGTGGAGG TCGATCTCGA CGACGACGCT
CCCGGCCCCG AGGTCGTCGT CCGCTAG
 
Protein sequence
MTSVALGIPS VRTRPIAERR KSRQIMVGSV PVGGDAPVSV QSMTTTVTAD INATLQQIAA 
LTASGCQIVR VAVPSQDDAE ALPIIAKKSQ IPVIADIHFQ PKYVFAAIEA GCAAVRVNPG
NIKKFDDKVG EIARAASDHG VPIRIGVNAG SLDPRLLQKY GKATPEALVE SALWECSLFE
EHGFRDIKIS VKHNDPVVMV QAYRQLAAQC DYPLHLGVTE AGPAFQGTIK SAVAFGALLA
EGIGDTIRVS LSAPPVEEIK VGIGILESLN LRERGLEIVS CPSCGRAQVD VYTLAEQVQA
GLEGLKVPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESQIVETLI
EEALRLAEEM GVEVDLDDDA PGPEVVVR