Gene Sros_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1946 
Symbol 
ID8665228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2085037 
End bp2086545 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative MFS transporter 
Protein accessionYP_003337677 
Protein GI271963481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.261804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCGA ACACTGTACG GGCCGAGCCC GACCCCCGGC GTTGGTGGAT CCTGGGAGTG 
CTCTGCCTGA GCCTGCTGGT CCTCGTGGTG GACAACACCG TGCTGAACCT GGCCATCCCG
GCCTTGATGA CGGACCTGGG CGCCAGCCCC TCCGACATCC AGTGGATCAT CGACGCCTAC
ATCCTGGTCT TCGCCGGTCT GCTGCTCACC TCGGGCAGCC TGTCCGACCG CTACGGACGC
AAGCGTTTCC TGATCATCGG CCTCGTCCTC TTCGGCGGGG CCTCGCTGAT CGCGCTGCTG
GTCACCGAGC CCTGGCAGCT CGTCGCCGCA CGCGCGCTGA TGGGCGTCGG CGGCTCGATC
CTGATGCCGA GCACCCTGTC GATCCTGATC ACCGTCTTCG ACGACAGCGA GCGCCGCAAG
GCCATCGCCG CCTGGAGCGC GGTGGCCGCG GTCGGTGTGA TCGCCGGCCC CACGCTGGGC
GGTTTCCTGC TGGAGCACTA CTGGTGGGGC TCGATCTTCC TGCTCAACGT GCCGATCGCC
GTCGTCGCCA TCGTCGCGGC CGTGCTGCTG ATGCCCGAGA CGCGCGGCCC GGCCCGCAAG
CTCGACCCGG TCGGCGTGCT GCTGTCCACC GTCGGCATGA GCGCCCTGGT CTTCGTGGTC
ATCTCGGCGC CCGGTAAGGG CTGGACCTCC TCCCCGGTGC TGGTGGCCGC CGCGCTGGCC
GTGCTGGCGC TGGGCGGGTT CGTGCTCTGG GAGCGGCGGG CCGAGCAGCC GATGCTGCCG
CTCGAACTGT TCCGCGACCG CAACTTCAGC GGCTCGTCGT TCTCGATCGT GCTGATGTCG
TTCGGCACCG GCGCGCTGCT GCTGATGCTC ACCCAGTATC TGCAGTTCGT GCTGGGCTAC
GGTCCCATGC AGGCCGGTTT CGCACTGCTG CCGTACGCCG TGGCCGCCGC GCTCTTCAAC
GGCGTCGGCG CGGCCCTCGG GCAGAAGGTC AGCAACCGCA CGCTGGTCGC GCTGGGGCTG
GGCGTGATGG CACTCGGCTT CGGCGTGCTC GCCTTCATGA CCGCCGACAC CGGGTACGGC
CTGATGATCA CGGGTCTGAT GCTCATGGGC GTCGGCGGCG GTCTGGCGGG CCCGGCGGCC
TACGCGACCC TGATGGGCGC GGTGCCGTCC GAGCACGCTG GCGTGGGATC GGCGCTCAAC
GACACCGTCC AGCAGGTGGG GATGGCGCTC AGCGTGGCCG TGCTCGGCAG CGTGCTGGCG
GGGGTCTACA CCTCCTCGAT GCCCGCCGGG GCCCCGGCCG TCGCGCGGGA CTCGATCGGC
GGCGCGATCC TGCTCGGCGA TCCGGGGCTG ATCCGGACCG CCCGGGACGC GTTCGTCTCG
GCCATGTCGT TCGGCTCCTG GGTGGGCGTC GGCTTCACCC TCGCGGCCGC CGTGCTGGCG
TTCATGGTGC TGCGCCCGGC CCCGGCGGCC CCGGCCGCGG AGCCGGGCCT GGTGGAGACG
GGGAGCTGA
 
Protein sequence
MESNTVRAEP DPRRWWILGV LCLSLLVLVV DNTVLNLAIP ALMTDLGASP SDIQWIIDAY 
ILVFAGLLLT SGSLSDRYGR KRFLIIGLVL FGGASLIALL VTEPWQLVAA RALMGVGGSI
LMPSTLSILI TVFDDSERRK AIAAWSAVAA VGVIAGPTLG GFLLEHYWWG SIFLLNVPIA
VVAIVAAVLL MPETRGPARK LDPVGVLLST VGMSALVFVV ISAPGKGWTS SPVLVAAALA
VLALGGFVLW ERRAEQPMLP LELFRDRNFS GSSFSIVLMS FGTGALLLML TQYLQFVLGY
GPMQAGFALL PYAVAAALFN GVGAALGQKV SNRTLVALGL GVMALGFGVL AFMTADTGYG
LMITGLMLMG VGGGLAGPAA YATLMGAVPS EHAGVGSALN DTVQQVGMAL SVAVLGSVLA
GVYTSSMPAG APAVARDSIG GAILLGDPGL IRTARDAFVS AMSFGSWVGV GFTLAAAVLA
FMVLRPAPAA PAAEPGLVET GS