Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1820 |
Symbol | |
ID | 8665098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1942323 |
End bp | 1943306 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
Protein accession | YP_003337552 |
Protein GI | 271963356 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.246405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTTCA GACTTGCGGG CCGGGCGGTC GTCGCAGGGC TCGCCGCCGT GCTGACCCTG AGCGCCTGTG GTGGTTCGGA CGCCAAGACC GACACCGCCA ACGCGAGCGG GCTTGAGAAG ACCAAGATCA CGATTGGCGC GCTGCCCATC CCCGACTCGG CCGCGCTCTA CATCGCCAAC AAGAGGGGCT TCTTCCAGAA AGAGGGCCTG ACGGTCGACA TCCAGGTGGT CCAGGGTGGC GCCCAGGCGC AGCAGTCCCT GTTCGGCGGC TCCCTCGACG CCACGCAGAC CAACTACGTC TCCACCTTCC TGGCCACGGC GGCCGGCAAC AAGCCGAAGA TCATCTCTGA CCTCTACCAG GCGACCCCGA ACTCCTTCAA CCTCATGGTG GCCAAGGACT CCTCGATCAA GACCCCGGCC GACCTGAAGG GCAAGAAGAT CGCGGTCAAC AGCCTCAGGA ACATCGGCAC CCTGTCGGTG ACCTCCGTGC TCAAGACGCA CGGACTGACC GACAAGGACG TCGAGTTCCT GGAGTTCCCC TTCCCCGACA TGGCCGGCAA GCTGGAGCAG GGCGTGGTCG ACGCGGCCTG GATGACCGAG CCGCACCTGA CCGCGGTCCA GAAGAACATC GGCGCCCAGA AGCTCGCCGA CACCATGGTC GACTCGACCG CCGACTTCCC CATCGCCGGC GTGATCGTCA CCGAGGACTT CGCCGCCAAG AACCCCAAGA CCGTCGCCGC CTTCCAGCGC GCGGTCGCCG AGGCCCAGAA GATCTCCGCC GCCGACCGCA AGGCCGTCGA GGAGATCCTG CCGACCTACA CCAAGGGGAT CGACGCGGCC ACCGCCGCCG TCATCACGCT CGGCACCTTC CCCACCAGCC TTGACGCCAC CCGCCTGCAG CGGGTGGCCG ACCTGATGCT CGAGCAGGGC CTGCTGAAGA GCAAGATCGA GGCCAAGTCC CTCCTCCTCG GAAACTCCGG GTGA
|
Protein sequence | MRFRLAGRAV VAGLAAVLTL SACGGSDAKT DTANASGLEK TKITIGALPI PDSAALYIAN KRGFFQKEGL TVDIQVVQGG AQAQQSLFGG SLDATQTNYV STFLATAAGN KPKIISDLYQ ATPNSFNLMV AKDSSIKTPA DLKGKKIAVN SLRNIGTLSV TSVLKTHGLT DKDVEFLEFP FPDMAGKLEQ GVVDAAWMTE PHLTAVQKNI GAQKLADTMV DSTADFPIAG VIVTEDFAAK NPKTVAAFQR AVAEAQKISA ADRKAVEEIL PTYTKGIDAA TAAVITLGTF PTSLDATRLQ RVADLMLEQG LLKSKIEAKS LLLGNSG
|
| |