Gene Sros_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1812 
Symbol 
ID8665090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1935920 
End bp1936693 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter, permease protein 
Protein accessionYP_003337544 
Protein GI271963348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.554956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.627316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGCC TGCCGGCCCG ATGGTGGAGC GTGCCCGTCG CGCTCGCAGG CTGGGAGCTG 
CTGACCCGGT GGGCTCGGGC GGTCTACTTC CCGCCGCCCT CGGCGATCGC GGCCCGGCTG
CACGAGATGT GGTTCTCCGG ACCGGCCGCC CGCCTCTTCC TGACCGACGA GGCGCTCGGC
GACGTGCTGC CCAGCCTGGG CAGGCTGCTG CTCGGCTGGA GTACGGCGTG CCTGGTCGGG
ATCGTCGCCG GGGTGGCCGT CGGCCGCTCG GCCCGCCTGT CGGAGTATGT CGGCCCGCTG
ATCCAGCTCG GCCGGTCCAT CCCCCCGCCC ACGCTGCTGC CGATCTTCCT GCTGCTGTTC
GGCGTGGGGT CCCCGATGCA GGTGGCCGCC ATCGTGTTCG GCGTCACGTG GCCGGTGCTG
ATCAACTCGG CGGACGGCGC CCGCTACGTG GACCGCGGAT ATCTGGAGAC CGCCCAGGTC
TTCGGGGTGA ACCGGGGCCG GCGGCTGCTG CTGGTCGTTC TCCCGGCGGC GGCCCCGAAG
ATATTCGCGG GCCTGCGGCT CAGCGTCTCG CTCGCCCTGA TCATGATGAT CGTCTCGGAG
CTGGTCGGCA GCACCGAGGG CATCGGCTAC CGGATGCTGG TCGCCCAGAG CGAGCTGGAC
ATCCCGTCGA TGTGGGCGGC GATCACCCTG ATCGGGCTGC TCGGCTACGG CCTGAACACG
GCGTTCCTCC GGGTGGAGCG GCGCGTGCTC GCCTGGCACC CGGCCGCCGC CTGA
 
Protein sequence
MRGLPARWWS VPVALAGWEL LTRWARAVYF PPPSAIAARL HEMWFSGPAA RLFLTDEALG 
DVLPSLGRLL LGWSTACLVG IVAGVAVGRS ARLSEYVGPL IQLGRSIPPP TLLPIFLLLF
GVGSPMQVAA IVFGVTWPVL INSADGARYV DRGYLETAQV FGVNRGRRLL LVVLPAAAPK
IFAGLRLSVS LALIMMIVSE LVGSTEGIGY RMLVAQSELD IPSMWAAITL IGLLGYGLNT
AFLRVERRVL AWHPAAA