Gene Sros_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1754 
Symbol 
ID8665032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1871277 
End bp1872653 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content70% 
IMG OID 
ProductL-serine ammonia-lyase 
Protein accessionYP_003337488 
Protein GI271963292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.244789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA GCGTCTTCGA TCTCTTCAAG ATCGGAATCG GCCCGTCCAG CTCGCACACC 
GGCGGGCCGA TGGCCGCCGC GCACAAATTC GCCCGCGGCC TCGACCAGGA CGGGCTCCTG
GACAAGACCG CCGGAGTCGA GGTGATCCTG TACGGCTCAC TCGGACTGAC CGGCAAGGGC
CACGGCAGCG ACAAAGCCGT CCTTCTCGGA CTGTCGGGCG AGAAGCCGGA GCTCGTGGAC
GTCGACACCG TCGACGACCG GCTGGCCGCC ATGCGCGCCT CCGGGACGAT CCTCCTGTAC
GGCTCGCGCG AGATCCCCTT CGTCGTCGGC GAGCATCTCG TCTTCGAACG CAAGATCTCG
CTGCCGCACC ACCCCAACGG CATGCGCTTC ACCGCCCTGT CCGAGACGGG CGAGCCGCTC
CGCGAGAAGG TCTACTACTC GGTGGGCGGC GGCTTCGTCG TGGACGAGAA CGCCACCGGC
GCCGATCGGA TCAAGCCCGA CGACACCGCC CTGCCGTACC CCTTCACGAC AGCCGCCGAA
CTGCTCACCC ACTGCGCGGA GACCGGCCTG TCGATCTCCG GGCTGATGCT GGAGAACGAG
AAGGCCTTCG GCCGCTCGGA GCAGGAGATC CGCGAGCAGT TGCTGAACCT GTGGCGGGTC
ATGGCCGAGT GCGTCCGGCG CGGCACCGCC AAGGAGGGCG TGCTGCCCGG CGGGCTGAAG
GTCAGGCGCC GGGCCCACCA GCTCTACCGG CGGCTGCAGA GCGAGTCCCC CGAGAAGGAC
CCGCTCCAGG CCATGGACTG GGTCTCGCTG TACGCCCTCG CGGTGAACGA GGAGAACGCG
GCGGGCGGCC GGATCGTCAC CGCCCCGACC AACGGCGCCG CGGGCATCGT CCCGGCCGTG
CTCACCTACT ACGACCGCTT CACCCCCAAG TCCGACGACG AGGGCGTGGT CCGCTTCCTG
CTCACCGCCG GGGCGATCGG CGTGCTGTTC AAGGAGAACG CCTCCATCTC CGGCGCCGAG
GTCGGCTGCC AGGGCGAGGT CGGCTCGGCC TGCTCCATGG CCGCCGCCGG GCTCACCGAG
GTGCTGGGCG GCACCCCGGA GCAGGTCGAG AACGCCGCCG AGATCGGCAT CGAGCACAAC
CTGGGCCTGA CCTGCGACCC CATCGGCGGC CTGGTCCAGA TCCCGTGCAT CGAGCGCAAC
GCGGTGGCCT CGATCAAGGC CATCGCCGCC GCCCGGATCG CGCTGCGCGG CGACGGCCGC
CACTTCGTCT CCCTGGACAA GGCCATCAAG ACGATGCGCG ACACCGGCCG CGACATGCTC
GACAAGTACA AGGAGACCAG CCGGGGCGGC CTGGCCGTCA ACGTCATCGA GTGCTGA
 
Protein sequence
MAISVFDLFK IGIGPSSSHT GGPMAAAHKF ARGLDQDGLL DKTAGVEVIL YGSLGLTGKG 
HGSDKAVLLG LSGEKPELVD VDTVDDRLAA MRASGTILLY GSREIPFVVG EHLVFERKIS
LPHHPNGMRF TALSETGEPL REKVYYSVGG GFVVDENATG ADRIKPDDTA LPYPFTTAAE
LLTHCAETGL SISGLMLENE KAFGRSEQEI REQLLNLWRV MAECVRRGTA KEGVLPGGLK
VRRRAHQLYR RLQSESPEKD PLQAMDWVSL YALAVNEENA AGGRIVTAPT NGAAGIVPAV
LTYYDRFTPK SDDEGVVRFL LTAGAIGVLF KENASISGAE VGCQGEVGSA CSMAAAGLTE
VLGGTPEQVE NAAEIGIEHN LGLTCDPIGG LVQIPCIERN AVASIKAIAA ARIALRGDGR
HFVSLDKAIK TMRDTGRDML DKYKETSRGG LAVNVIEC