Gene Sros_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1562 
Symbol 
ID8664839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1659815 
End bp1660399 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003337298 
Protein GI271963102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.196181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC GCCTGCGCGC CTCCAGGCCC CGGCAGTCGG CGGCGGTGAC CCGAAAGGCC 
ATCCACGACG CCGCGCACGA GCTCTTCCGC AACGAGGGCT TCGACGCCGT CGGCATACGG
GCCGTCGCCG CCCGCGCGGG GGTCGACGCG GCCCTCGTCA TCCGGCACTT CGGCTCCAAG
GAACGGCTGT TCCTGGAGGC GATGACGGTC GACCTGCCAG CGATCAAAGT CATGGAGGGC
CCGCTGGAAG GGATGGGCCG AGCGATCGTG GAGCACGTGG TGTGCCTGCC GTCATCCAGG
CCGGGCGCGT TGGCTGTGAC CGCTCTCGCC GCTCTGTTCC GGGCCTCGGA CCGGGAGGAG
GTGCAGCGGA ACCTGCGGGA AACGATCGAG AACGTCTTCG CCGAGCCTCT CGTCCGGCGC
CTGGAGGGCG GCGATGCCGA GCTGCGCGCC CATCTGATCG CCGCGCAGCT CGGCGGGCTG
CTCACCAGCA TGCATGTGGT GCAGGACCCT GTGCTGCTCG CGGCCGACCG GAGCGCGATC
GTCGTCCGAT ACGGAGACTC GATCCAGCAG CTGATCGGCA CCTGA
 
Protein sequence
MTTRLRASRP RQSAAVTRKA IHDAAHELFR NEGFDAVGIR AVAARAGVDA ALVIRHFGSK 
ERLFLEAMTV DLPAIKVMEG PLEGMGRAIV EHVVCLPSSR PGALAVTALA ALFRASDREE
VQRNLRETIE NVFAEPLVRR LEGGDAELRA HLIAAQLGGL LTSMHVVQDP VLLAADRSAI
VVRYGDSIQQ LIGT