Gene Sros_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1411 
Symbol 
ID8664686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1471088 
End bp1472374 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337148 
Protein GI271962952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.184904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00790445 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAGACG GTCACGGCTC CACTCCCGAC ACGCCACCCG GCTGGGCGTC CAACCAACCT 
CCGCCGTACG GCGACGCCCC GGGATCACCG TGGACCGCGC CCGGCTCCGG CCCCGGCGCG
CCACCGCCGC AGCCGCCCCC GCAGCAGCCC CACGGCGGGC AGGCGCCGCC GTACGGCCAG
CCCCCGCCCC ACCGGCCCGG CCCGTACGGC CCGCCGCCCC ACGGCTTCCC CCCGCCCCCG
GCGATGCGGC CGGGGATCAT CCCGCTGCGC CCGCTCGGCA TCGGCGACAT CCTCGACGGC
GCCATCAAGC TGATCCGTTC CAACCCCAAG ACCATCCTGG GCCTTTCGGC GATCGTCGCC
GCGCTCGGGG CGATCCCGGT GGCGATCGGC CAGGCGGTCA TGATCGGCGA CCTGGGCGCC
GGCCTCGACG ACCCCTCCGT CCTGGAGGAC CCGCAGGACA TCGGCTTCCT CGCCCAGTAC
GGCGGGACGC TGATCTCCTA CGCGGTGCAG TTCGTCGCGG TGACCCTGCT CACCGGCGTG
CTGACCCGGA TCCTGGGCCG GGCGGTCTTC GGCGGCAAGA TGAGCGTGGG CGAGGCCTGG
CAGCTGACCC GCAACCGGGT GCCCACGCTG TTCGGGCTGG TGGCCATCGG GATGCTGGTC
ATGCTGATCC CCATGGTCGT GGTCATCGCG GTCATCGCCG GGCTGGGGGC GGCGGGGGCC
GACTTCGGGG CGCTGTTCCT CGTCGGCGCG CTGGCGATCC TGGGCTTCGT CGCCTACGCC
CTCTTCATCA CCACCCGCCT GGCGCTCGCG GCGTCGGTGG CGGTGCTGGA GCGGCGCGGC
GTCATCGACT CCCTGCGCAG GTCCTGGAAC CTGGTGGGCG GCGGTTTCTG GCGGACGCTC
GGCATCCTGC TGCTGACCCA GCTCATCACG GCCCTGGTCG CCCTGGTGCT CTCCTTCCCC
TTCACCATCA TGGCCTTCGT CGTCGGCATG ATCGGCAAGG GCTCCACCGG CTCGCAGATC
GGCACGGCGA TCCTGATCGC GGTCGGCGGC ACCGTCAGCG CCATGATCAC CTATCCGTTC
CAGGCCGGGG TCAACGGCCT GCTCTACGCC GACCGGCGGA TGCGCGCCGA GGCGTTCGAC
CTGGTGCTGC AGACCGCGGC GATCGAGCAG CAGCGCCAGG GCTGGGTGCA CGCCTCCGCC
GACGACCTGT GGGACCCGTC CATCACGCCC AGCGGACCCG GCCGGTACGA CCAGACCGGC
CAGGGAGCTC CGTGGCGCGA CTCCTGA
 
Protein sequence
MSDGHGSTPD TPPGWASNQP PPYGDAPGSP WTAPGSGPGA PPPQPPPQQP HGGQAPPYGQ 
PPPHRPGPYG PPPHGFPPPP AMRPGIIPLR PLGIGDILDG AIKLIRSNPK TILGLSAIVA
ALGAIPVAIG QAVMIGDLGA GLDDPSVLED PQDIGFLAQY GGTLISYAVQ FVAVTLLTGV
LTRILGRAVF GGKMSVGEAW QLTRNRVPTL FGLVAIGMLV MLIPMVVVIA VIAGLGAAGA
DFGALFLVGA LAILGFVAYA LFITTRLALA ASVAVLERRG VIDSLRRSWN LVGGGFWRTL
GILLLTQLIT ALVALVLSFP FTIMAFVVGM IGKGSTGSQI GTAILIAVGG TVSAMITYPF
QAGVNGLLYA DRRMRAEAFD LVLQTAAIEQ QRQGWVHASA DDLWDPSITP SGPGRYDQTG
QGAPWRDS