Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1323 |
Symbol | |
ID | 8664598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1369484 |
End bp | 1372123 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Phosphoenolpyruvate carboxylase |
Protein accession | YP_003337063 |
Protein GI | 271962867 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.133852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCA TCGCGCACCA TCAGGCAGAA CGTTCTTCCG CCGTCACCGA GATGCCCGAC GAGCTGCGCG CGGACGTGCG GCTGCTCGGC GAGCTCCTGG GGCAGGTCAT CGCCGAGTAC GGCGGTGATG ATCTGCTCGC CGATGTCGAA CGTCTTCGCA AGGCCGTCAT CGCGGCCCGT CGCGGGAAGG TCTCGGTCGA CGAGATCACC GCGATGGTCG CCGAGTGGCC CGTCGAGCGG GCGGTGCAGA TCGCCCGGGC GTTCACCTGC TACTTCCACC TGGCCAACCT GGCCGAGGAG CACTTCCGCA TCCGCACGCT CCGGGTCCGC GACACCGGCG AGGAGCCGCT GCCCGAGTCC CTGGCGCAGG CCGTGCAGGA GCTCGGCGGC GAGCGCGTCA CCGAGCTGGT GGAGGGGCTG CGGCTGCACC CGGTGCTGAC CGCGCACCCG ACCGAGGCCC GCAGGCGCGC GGTGGTCACC GCGATCCAGC GGATCAGCGG CCAGCTCGCC GCCTACAACA GTCCCGAGCG GGGCGCCGCC GAGCGGGCCG AGACCCGGCG GCGGCTGCTG GAGGAGATCG ACCTGCTCTG GCGGACCTCC CAGCTCAGGT CCACCAAGCT CGACCCGCTG GACGAGGTCC GCACCGCCAT GGCGGCCTTC GACGAGACCC TGTTCCGGGT GGTGCCGCTG GTCTACCGCT CGCTGGACGC CGCGCTCGGC GAGGGCACCG GCACCCGCGA GCCGCTGGCC CGTCCCTTCA TCCGCTACGG GAGCTGGATC GGCGGTGACC GGGACGGCAA CCCCAACGTC ACCGCCAAGG TGACCAGGGA CGCCGTGCTC ATCCAGGCCG AGCACGTGCT GATCGCCCTG GAGAACGCCA CCCACAGGAT CGCCCGCACC CTCACCCTGA CCGCGGGCTA CACCCCCGCC TCGCCGCGGC TGCGGGCCGC GCTCACCGCC GCCGAGAACG ACCACCCCGA GCTGGTCTCG GAGATGGCCA CCCGCTCCCC GCAGGAGCCG CACCGGCAGT GGCTGCTGTT CGTCGCCGCC CGGATCGTGG CCACCCGGCA GCGCGGCCTC GACCTGGCCT ACCGCTCGCC CGAAGAGCTC CTGGGCGACC TGCGGACCGC CCAGGAGTCG CTGGTCGCGG CCGGGGCCGA GCGGCAGGCG TACGGCGAGC TGCAGCACCT GATCTGGCAG GTGGAGACGT TCGGCTTCCA CCTGGCCGAG CTTGAGGTGC GCCAGCACTC GCAGGTCCAC GCCGCCGCGC TGGCCGAGCT CGCCGCCGGG CGGACCTCCG AGCGCACCGA CGAGGTCCTG GCCACCATCC GGACGATCGG CTGGATCCAG GAGCGGTACG GCGTGACCGC CTGCTCCCGC TACGTCGTCT CCTTCACCCG CTCGGCCGAC GACATCGCCG CGGTCTACGC GCTGGCCGGG CACGCGCTCG GCGACAAGGC CCCGCAGCTC GACGTGGTCC CGCTGTTCGA GTCGGGCGCC GACCTGGCCA ACGCCCCGGG AGTGCTGTCG GGGATGCTGG AGATCCCGGG CATCCAGCAG CGTCTCGCCG CCAACGGCCG CCGCCTGGAG GTCATGCTCG GCTACTCCGA CTCCGCCAAG GAGCTCGGCC CGGCCGCCGC GACCCTGAAG CTGTACGAGG CGCAGGAGGC CCTGGCCGCG TGGGCCGCCG AGCACGACGT GCGGCTGACG CTGTTCCACG GCCGTGGCGG CGCCCTGGGC CGGGGCGGCG GTCCGGCCAA CCGGGCCGTG CTCGCCCAGG CGCCGGGCTC GGTCGGCGGC AGGTTCAAGG TCACCGAGCA GGGCGAGGTC ATCTTCGCCC GCTACGGCCA CGCCGCCATC GCCCGCCGCC ACATGGAGCA GGTCACCTCG GCGGTGCTGC TCGCCTCCAC CCCGTCGATC GAGGCCCGTA CGGCCGAGGC CGCCGGACGC TTCCGGGGCA TGGCCGAGCA GGTCGCCTCC GCCTCGGAGA AGGCCTACCG GTCGCTGACC GAGGCACCCG GCTTCCCCGA GTGGTTCTCC CTGGTCAGCC CGCTGGAGGA GATCGGCTCG CTCCGCCTCG GCTCCCGCCC CGCCCGGCGC GGCCTCGGCG CGCCCCGGTC GCTGGACGAC CTGCGGGCCA TCCCCTGGGT GTTCGCCTGG GCCCAGACCC GGGTCAACCT GCCCGGCTGG TACGGCCTGG GCAGCGGGCT GCAGGCGGTG ATCTCCGAGT CCGGCCTGGA CGAGCTGCGC GCCGCCTACC GCGAGTGGCC GCTGTTCGCC TCGCTGCTGG ACAACGTGGA GATGTCGCTG GCCAAGACCG ACCGCGACAT CGCGGCCCGC TATCTCGCGC TGGGCGGCCG GGACGACTTC GTCGAGCAGG TCCTGCGCGA GTACGACCTC ACCCGCCGTC TGGTCCTGGA GATCACCGGC CACAGCCGCC TGCTGGAGAA CCGCAGGGTG CTCTCACGCG CGGTCCAGCT CCGCGACCCC TACGTGGACG CGCTCTCCCA TCTCCAGCTC CGCGCGCTGT CGAGGCTCCG CGCCGACGAC GGGCTGTCGG AGGAGGAGCG CGAGCGCCTG TCCACGCTGC TGCTGCTGTC GGTCAACGGC GTCGCCGCCG GCCTGCAGAA CACCGGTTGA
|
Protein sequence | MSAIAHHQAE RSSAVTEMPD ELRADVRLLG ELLGQVIAEY GGDDLLADVE RLRKAVIAAR RGKVSVDEIT AMVAEWPVER AVQIARAFTC YFHLANLAEE HFRIRTLRVR DTGEEPLPES LAQAVQELGG ERVTELVEGL RLHPVLTAHP TEARRRAVVT AIQRISGQLA AYNSPERGAA ERAETRRRLL EEIDLLWRTS QLRSTKLDPL DEVRTAMAAF DETLFRVVPL VYRSLDAALG EGTGTREPLA RPFIRYGSWI GGDRDGNPNV TAKVTRDAVL IQAEHVLIAL ENATHRIART LTLTAGYTPA SPRLRAALTA AENDHPELVS EMATRSPQEP HRQWLLFVAA RIVATRQRGL DLAYRSPEEL LGDLRTAQES LVAAGAERQA YGELQHLIWQ VETFGFHLAE LEVRQHSQVH AAALAELAAG RTSERTDEVL ATIRTIGWIQ ERYGVTACSR YVVSFTRSAD DIAAVYALAG HALGDKAPQL DVVPLFESGA DLANAPGVLS GMLEIPGIQQ RLAANGRRLE VMLGYSDSAK ELGPAAATLK LYEAQEALAA WAAEHDVRLT LFHGRGGALG RGGGPANRAV LAQAPGSVGG RFKVTEQGEV IFARYGHAAI ARRHMEQVTS AVLLASTPSI EARTAEAAGR FRGMAEQVAS ASEKAYRSLT EAPGFPEWFS LVSPLEEIGS LRLGSRPARR GLGAPRSLDD LRAIPWVFAW AQTRVNLPGW YGLGSGLQAV ISESGLDELR AAYREWPLFA SLLDNVEMSL AKTDRDIAAR YLALGGRDDF VEQVLREYDL TRRLVLEITG HSRLLENRRV LSRAVQLRDP YVDALSHLQL RALSRLRADD GLSEEERERL STLLLLSVNG VAAGLQNTG
|
| |