Gene Sros_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1288 
Symbol 
ID8664563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1328152 
End bp1330449 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content72% 
IMG OID 
ProductAlpha-glucosidase 
Protein accessionYP_003337029 
Protein GI271962833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACC GTCCCCCCTT GATCGCGCAT GAGTACTTCG TCGCCGATCC GCCGGAGCTG 
CCCGTCCGCT CCCACGGCGA GACGGGCCTG TCGGCGCTGA CCTCGGCCGA GCTGGTGGCG
GCCGAGGCCG CCGGAGTGAC GCTGAAGGCC GTGACCTCGG CAGGGGAGAC CCTCGTGGTC
CAGGTGGGCG TGGTGGGCGA GGGCGTGATC CGGGTCCGGC TCGGCCAGGA CGTGGACGCG
CGGACCCGCT CGGCCGCCGC GATCTCCATG GTCACGCCGG GCGTGTTCGC CGGGGCGCGG
GTGGAGGCGG GCGACGGGAC GATCCTGCTC GACGCGGGCC CGCTCCGCGC GGAGATCACC
TTGGCTCCGT GGCACCTGAG GTTCACCGAC GCGGCCGGGG CGACCCTGCT GGAGCAGGAC
CCGGGTCATA CCGACATCAG CGGCCGCCTG CGCACCCTCC CGTTCGGCCG CTCCAGCCGG
GACGGCGCCG TGGCGGGCTA CCACGAGAGC TTCGCCGCCC CCGCCGACGA GGCGTTCACC
GGGTTCGGCG AGTCGTTCAC CCCGCTGGAC AAGCGCGGCC AGCGGCCGGT CATGTGGAAC
TTCGACGCCT TCGGCGCCGA GTCGCAGCGG GCCTACAAGA ACGTGCCGTT CTACCTGTCC
AGCCGGGGCT ACGGCGTGCT GGTGGACAGC GGCACGCCGG TGGAGTTCGA CGTCTGCCAG
TCCACGCACA GCACCGTGCA GATCGTGGTC CCGGACGACC TGATCGACTA CTACGTGATC
GCCGGACCCA CCCCGCCGGA GGTGCTCGAC CGGTTCGACC TGCTGACCTG CCGTCCGGCG
CTGCCGCCCA AGTGGGCGTT CGGCACCTGG ATCTCCTCGG GGTTCTTCGT CGACACCCAG
GAGCGGGTGA TGGCGCGGGC GCGCAGGATC CGGGAGCGGG GGATCCCGTG CGACGTGCTC
CATCTGGACA CCTACTGGCA GACCGACGGG CACTGGTCCG ACCTGCGGTG GGACGCGGCC
AACTTCCCCG ACCCCGAGGG CATGCTGGCG GAGCTGGACG GGATGGGCTT CAAGGTCTGC
CTGTGGATGA ACCCGTACAT CTCCCATCTG AGCCCGGCGT TCCCGCAGGC CGCCCAGGAC
GGATATTTCC TGAAAAAGGC TGACGGTGAG GTCTACGTGG CCGACTGCTG GCACGGCTCC
TACCCGCCCT GCGGCATCGT CGACTTCACC AACCCCGCCG CCGTGGAGTG GTTCCAGAGG
CTGCTGCGGC CGCTGCTGGA GCAGGGCGTG CAGGTGTTCA AGACCGACTT CGCCGAGGCC
GTGCCGCACG ACGCGGTCGC GGCCAACGGG ATGACCGGCG CCGACCTGCA CAATGTCTAC
ACGCTGCTGT TCAACGACGC CGTCTCCGAG GTGACCAGGG AGGTCGCCGG GCACGGGATG
GTCTGGGCGC GCTCGTCCTT CCTCGGCGGG CAGCGGCACT CGGCGCAGTG GAGCGGCGAC
ACCTACACCA GCTACCCGGC GATGGGCAGC ACGCTGCGCG GCGGGCTGGC GCACGGCCTG
TCCGGCATCC CGTTCTGGAG CCACGACGCG GGCGGGTTCA CCGGCCGCCC CACCGACGAC
CTGTACGTCC GCTGGACCCA GTTCGGCGCC CTCTCCCCGC TGCTGCGCCT GCACGGCACC
ACCAGCCGCG AGCCGTGGGA GTTTCCCGAG GTCGAGGCCG AGGCCGTCGA GGCGCTGAGG
CTGCGCTACC GGCTCATGCC CTACCTCTAC ACGGCGGCGG TGGAGGCCGC GCGGACCGGG
GCGCCGATGA TGCGGGCCCT GTGCGTGGAC CACCCCGACG ACCCGGTGGC CTGGCAGGCC
GACCTGGAGT ACCTCCTCGG CCGCGACCTG CTGGTGGCCC CGATGACCTC CCCGGACGGT
GTCCGGAAGG TCTACCTGCC CGCGGGCGGG TGGGTGGACC ACTGGACCGG CGAGGTGCTG
GCGGGCGGCC GGTACGTCAC GGTCTCCATG CCGCTGGACC GGATCCCGCT GTTCGTCCGG
CACGGCGCGC TCATCCCGGT CCTGGCCGAG CCGGGCGAGG CCGTCGGAGA CGGGCCGTTC
GGAGAGATCA CGCTGATCGG CTACGGCGTG GGCGAGAGCC GTACCACCGT CTCCGACCTC
GACGGAGACA CCACGATCAC CGCCGTCCCG GACGGGGACG GGCTGCGGGT GACCGTTTCG
GGGAGCGCGC GGATCGCGGG CGTCGAGCTG GTGGGGGTCG GCGTCCCGGT CGTGGTCACG
ACCGTCCGGG AGACGTAG
 
Protein sequence
MPYRPPLIAH EYFVADPPEL PVRSHGETGL SALTSAELVA AEAAGVTLKA VTSAGETLVV 
QVGVVGEGVI RVRLGQDVDA RTRSAAAISM VTPGVFAGAR VEAGDGTILL DAGPLRAEIT
LAPWHLRFTD AAGATLLEQD PGHTDISGRL RTLPFGRSSR DGAVAGYHES FAAPADEAFT
GFGESFTPLD KRGQRPVMWN FDAFGAESQR AYKNVPFYLS SRGYGVLVDS GTPVEFDVCQ
STHSTVQIVV PDDLIDYYVI AGPTPPEVLD RFDLLTCRPA LPPKWAFGTW ISSGFFVDTQ
ERVMARARRI RERGIPCDVL HLDTYWQTDG HWSDLRWDAA NFPDPEGMLA ELDGMGFKVC
LWMNPYISHL SPAFPQAAQD GYFLKKADGE VYVADCWHGS YPPCGIVDFT NPAAVEWFQR
LLRPLLEQGV QVFKTDFAEA VPHDAVAANG MTGADLHNVY TLLFNDAVSE VTREVAGHGM
VWARSSFLGG QRHSAQWSGD TYTSYPAMGS TLRGGLAHGL SGIPFWSHDA GGFTGRPTDD
LYVRWTQFGA LSPLLRLHGT TSREPWEFPE VEAEAVEALR LRYRLMPYLY TAAVEAARTG
APMMRALCVD HPDDPVAWQA DLEYLLGRDL LVAPMTSPDG VRKVYLPAGG WVDHWTGEVL
AGGRYVTVSM PLDRIPLFVR HGALIPVLAE PGEAVGDGPF GEITLIGYGV GESRTTVSDL
DGDTTITAVP DGDGLRVTVS GSARIAGVEL VGVGVPVVVT TVRET