| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1258 |
|---|
| Symbol | |
|---|
| ID | 8664533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1291700 |
|---|
| End bp | 1293157 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_003336999 |
|---|
| Protein GI | 271962803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.645684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTAATG ACCTATCGAC CTCCCCGACG GAGACCCGCC CCGGGAACGG GCTGCTCCTC
CTCGCCGTCC TCGGCGGGAT GTTCCTGGCC ATGCTCGACC AGACGATCGT CGGCACCGCG
CTGCCCCGGA TCACCCAGGA GCTCGGCGGC ACGGGCCTCT ACACCTGGGT CGTGACGGCC
TACCTGCTGA CCTCCACGAT CACCGTCCCG CTGTACGGCA GGCTGTCGGA CACCTACGGA
CGCAAGCCGC TGCTGCTCAC CGGCGTCGTG CTGTTCCTGA TCGGCTCGCT CCTGTGCGGT
CTCGCCCAGG ACATGAGCCA GCTCATCGGC TTCCGCGCGC TGCAGGGTCT GGGCGCGGGA
GCGTTGCTGC CGCTCTCCCT GGCACTGGTG GCCGACCTGT TCCCGCCGGA CAAGAGCGGC
CGGGTCCAGG GCGCGCTGGG CGGGGTGATG GCGCTGAGCT ACATCGCCGG CCCGTTCCTC
GGCGGCGTCT TCACCGACCA GGCCAGCTGG CGCTGGGCCT TCCTGGTCAA CCTCCCCATC
GGCCTGGTCC TCATCGCGAT CATCGTGGTA CGGCTGCCGC ACGTGGCCGG TCAGGGGCGC
GGCGTCCGCC CCGACTATCT CGGCATCGCG GTCTTCAGCG GGGCGATCGG CGCGCTGCTC
CTCGGCCTGA CCGAAAAGGG CCTGGACGAC CATGCCTGGA CCAGCGGACC CGTGCTGTGG
CCCGTTGTGA CGTCGGTCCT GCTCCTGACG CTGTTCGTGC TCGTCGAGCG CAGGGCGGCG
CAGCCGATCA TCCCCCTGGA GCTGTTCCGC AACCGGACCT ACACGCTGGC CAACGCGACC
TCGTTCCTCA CCGCGTTCTG CCTCTACGCC GGGGTGGTGT TCCTGCCGCG CTACTTCCAG
GAGTCCCTGG GGCTGAGCGC CACCGAGTCG GGCCTGCGCA TCTACCCGCT CATGCTCGGA
ATGGTGGCCG GCAGCGGGAT CGCCGGCGTG CTCATGTCCA GGACCCAGCG TTACAAGCCG
TGGCTGATCG CCGGGGTGGG CCTCATCGTG CTCGGGGCGC TGCTCTGCGC CGGGCTCACC
GCCGAGACCT CGGGCCTGGC CCTCGCGGGG TGGATGGCGC TCCTCGGCCT GGGCATGGGG
CCGATGCTGT CCGGGCTGAC CGTGGCGGTC CAGTATTCGG TCCCGCCCCG GTTCATCGGC
ACCGCCAGCG CGAACCTGAC CTTCTTCCGG CAGATCGGCG GCTCGGTCGC GCTGGCCCTC
GCCGGGACCC TCTACGCCTC GGTGGTCAGG GACGAGGCGC CCGTCCACGG ACTGAGCGCC
GCGCACGCCT CCGCCGCCGC GAGCGTCATC CCCTGGCTCG CCGTCGGCGG GGCGCTCGTC
GCGCTCGTCG CGCTGGTCGC CCTGCCCGGA GGCCGGATCA AGGCACTCGC CGCAGGACCG
GCGACGCTGG ACGGGTAA
|
|---|
| Protein sequence | MSNDLSTSPT ETRPGNGLLL LAVLGGMFLA MLDQTIVGTA LPRITQELGG TGLYTWVVTA
YLLTSTITVP LYGRLSDTYG RKPLLLTGVV LFLIGSLLCG LAQDMSQLIG FRALQGLGAG
ALLPLSLALV ADLFPPDKSG RVQGALGGVM ALSYIAGPFL GGVFTDQASW RWAFLVNLPI
GLVLIAIIVV RLPHVAGQGR GVRPDYLGIA VFSGAIGALL LGLTEKGLDD HAWTSGPVLW
PVVTSVLLLT LFVLVERRAA QPIIPLELFR NRTYTLANAT SFLTAFCLYA GVVFLPRYFQ
ESLGLSATES GLRIYPLMLG MVAGSGIAGV LMSRTQRYKP WLIAGVGLIV LGALLCAGLT
AETSGLALAG WMALLGLGMG PMLSGLTVAV QYSVPPRFIG TASANLTFFR QIGGSVALAL
AGTLYASVVR DEAPVHGLSA AHASAAASVI PWLAVGGALV ALVALVALPG GRIKALAAGP
ATLDG
|
|---|
| |