Gene Sros_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1235 
Symbol 
ID8664510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1264782 
End bp1265501 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336976 
Protein GI271962780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120217 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGTCTG AGAACGAGAT CAACCGGGTA CTCGTGGTGA CCGCGCACCC GGATGACGTC 
GACTTCGCCG CCGCGGGATC GATCGCGCAG TTCACCGACC GGGGCGTCGA GGTGACCTAC
TGCATCGTCA CCGACGGCGA CGCGGGCGGC TTCGACCGGG AGCTGGACAA CGGGGGCATG
GCGGAGCTCC GCCGTACCGA ACAGACCAAC GCGGCGAAGA TCGTCGGCGT GACCGACCTG
CGCTTCCTCG GCTACCACGA CGGGACCGTG GTGCAGAGCC TGGACCTGCG GCGCGACATC
ACCCGGGTCA TCCGCCAGGT CCGACCCGAC CTGGTGATCA CTCACACCCC GGAGCGCAAC
TACGGGTTCA TCGCCCCCAG CCACCCCGAC CACCGCGCGG TCGGCGGCTC CGCGCTCGAC
GCCGTCTACC CCGACGCGCG CAACCCCTAC ACCTTCCCCT CCCTCCTGCT GGAGGAGGGC
CTGGAGGCGT GGACGGTCCG GGAGGTCTGG CTCAACGGCG GCCAGACCCC CGACCATCAC
GTCGACATCA CCGGCACCTT CGAACGCAAG CTCTCCGCGC TGCGCGCCCA TGTGAGCCAG
ACCAGCCACA TGGAGGGGTT CGACGACTTC CTCCGGACCC GGTTCTCACA GGTCGCGGCC
GAGGCGGGCC TCGGGGAGGG CCGTTACGCC GAGGCCTTCC AGCGGGTCCC CACGGCCTGA
 
Protein sequence
MLSENEINRV LVVTAHPDDV DFAAAGSIAQ FTDRGVEVTY CIVTDGDAGG FDRELDNGGM 
AELRRTEQTN AAKIVGVTDL RFLGYHDGTV VQSLDLRRDI TRVIRQVRPD LVITHTPERN
YGFIAPSHPD HRAVGGSALD AVYPDARNPY TFPSLLLEEG LEAWTVREVW LNGGQTPDHH
VDITGTFERK LSALRAHVSQ TSHMEGFDDF LRTRFSQVAA EAGLGEGRYA EAFQRVPTA