Gene Sros_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1156 
Symbol 
ID8664431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1179950 
End bp1180588 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336898 
Protein GI271962702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.493631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.957952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACG TGACCGAGGG ATGCGTCGCC GACGCCAAAA ATGGGGTAAG GCTTGCGACG 
AGATCTGACG GGGTCGCCCA CAGGGATGAT CTCAAGGATC TGACAAGCCT CGCCGTTCAG
GGGGATCGCA CCGCGATCGA AACCCTGATC GCGCAGTTAC GGCCAATGGT CGTCCGTTAT
TGCCGTGCTC GTCTCGGCCG GGTTTCCGGT CAATATCACA TCGCAGACGA CGTGGCCCAG
GAAGTATGCA TCGCGGTGCT GTCCGCACTG CCCCGTTACC GGGACATGGG ACGCCCGTTC
GCCTCCTTCG TCTTCGGCAT CGCCTCTCAC AAGGTGGCCG ACGCGTTGCG CAGCTCCGTG
CGCTCCGCCG TACCCACCCA GGACCTCCCG GACGGGCCTG ACGAGGGCCC GGGGCCGGAG
GAGACCGTGG TCCGCTACAT CGAGGCCGAG CACGCCCGCA GGCTGCTCTC CAGGCTCCCG
GACAACCAGC GCCAGCTGCT CATGCTCCGT GTGGTGTCGG GCCTCTCCGC GGAGGAGACG
GGTAATGTAC TGGGCATGTC ACCAGGTGCG GTCCGCGTCG CCCAGCATCG GGCGCTGGCC
CGGCTGCGGG CGATGGCCGA GCTGGAGTCG ATAGCTTGA
 
Protein sequence
MPNVTEGCVA DAKNGVRLAT RSDGVAHRDD LKDLTSLAVQ GDRTAIETLI AQLRPMVVRY 
CRARLGRVSG QYHIADDVAQ EVCIAVLSAL PRYRDMGRPF ASFVFGIASH KVADALRSSV
RSAVPTQDLP DGPDEGPGPE ETVVRYIEAE HARRLLSRLP DNQRQLLMLR VVSGLSAEET
GNVLGMSPGA VRVAQHRALA RLRAMAELES IA