Gene Sros_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1131 
Symbol 
ID8664406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1154537 
End bp1155889 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID 
ProductSMC domain protein 
Protein accessionYP_003336873 
Protein GI271962677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.526004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTC GCCTGCTGGA ACTGCGCCTC ACCGAGTTCA AGACCTTCCG GGACGCGACT 
CTTCCTCTGG GTGGCATGAC GACGCTCATC GGCCGCAACA GCAGTGGAAA GTCGAACGCC
CTCGACGGGC TTGAGGTGCT GTCCCGCCTG GCGTCCGGAG CCGACCTCGT TGACGCGCTG
GACAGCAGGC GAGGTGACGA AGGACCCCTG CGTGGAGGCA TAGAGGGATG TCCTCCCCAT
GGGGCGGACC AATTCCGACT TGGTTGCACC GTTATGTCCC CCAGCCGGGT CGGGAGCGGC
TACATCCTCA TATGGCTCGA TGTCACCATT CAGGTGCGCC CGGAACCGGA GATCATCAGC
GAGACCCTCC GCGGCCTGTC GGAGAAGCGC CGTTCGACGC GGAACCCGGC AGGCCAGATC
GCACACGAGC TCCTCAAGAC GGTGGACGCG GCCCCTGGCT CCGGCAGCAT CGACGCCACC
TGGTACAACG GCCGGCGAGG GCGGGACCCC AGAGCGCCGT TCCGATCCAC CCGGCTGCTC
ACCAGCCAGC TCCCACTCAG GCTCGCGGGA GAGACGGAGG CCGAGCACCG CGTCACCACG
GCCGCGGAGG ATGTCCTGGA GGCGCTCCGC AGCGTCTTCC ACCTGGACCC CGTGCCTCAC
CTCATGAGGC AGTACGTTCC CAGCCGTGAC ACGCGGCTAC GTCGGACCGC CGAGAATCTC
TCCGCCGTGG TCGGCCACAT GAGGGAGAAC GATCCCCAGC GGTTCCGGCA ACTCGTCGCC
GGCGTGCAGG GGCTCGTCGA ACACGAGGTG ACGGGGATCG AGGTCATCCG CTCACCGCTC
AACGACGTGA TGCTGGCCCT GCGGGAGGAC GGGGCCGTCA CGCCGGCCAG GGAGATGAGC
GACGGCCTGC TGAGGTTCGC GGCCATCGCC ACAAGCCTCC TCCGTCAGGG GCAGGACCTC
GATCTCGGCG GGCGCGGCGC GGAGGATGAC GGCCGCCCCC CGACTCTGGT GATCGAAGAG
TTGGAGAACG GCCTGCACCC CTCCCAAGCC ACCGAGATAC TTGGCCTCGT CAAGCAGGCC
ACACAGGAAA ACGCCTCCCA AGTGATCTTC ACGACCCACA GTCCCGCCCT GCTTTCGGCT
CTCGAAGCGG AGGATCATGA GCACGTCGTC GTCTGCTCCC GTGACCGCGA CACCGGTCTT
TCCCACCTTC GGAAACTTCC GGAGATGGAG GGCTACCCCA GCTTGATGGC TCAAGGCGAT
CTCGGCACGA TCGTCTCCTC CGGCCTTCTG GAGCGGGCAC CCGCTCCGGC CCGTGACTTC
ACCGAGTTCG ACCGGCTCAT GGGGATCGGC TGA
 
Protein sequence
MKSRLLELRL TEFKTFRDAT LPLGGMTTLI GRNSSGKSNA LDGLEVLSRL ASGADLVDAL 
DSRRGDEGPL RGGIEGCPPH GADQFRLGCT VMSPSRVGSG YILIWLDVTI QVRPEPEIIS
ETLRGLSEKR RSTRNPAGQI AHELLKTVDA APGSGSIDAT WYNGRRGRDP RAPFRSTRLL
TSQLPLRLAG ETEAEHRVTT AAEDVLEALR SVFHLDPVPH LMRQYVPSRD TRLRRTAENL
SAVVGHMREN DPQRFRQLVA GVQGLVEHEV TGIEVIRSPL NDVMLALRED GAVTPAREMS
DGLLRFAAIA TSLLRQGQDL DLGGRGAEDD GRPPTLVIEE LENGLHPSQA TEILGLVKQA
TQENASQVIF TTHSPALLSA LEAEDHEHVV VCSRDRDTGL SHLRKLPEME GYPSLMAQGD
LGTIVSSGLL ERAPAPARDF TEFDRLMGIG