Gene Sros_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1106 
Symbol 
ID8664381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1122882 
End bp1124198 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID 
Productprotein translocase subunit SecY/sec61 alpha 
Protein accessionYP_003336848 
Protein GI271962652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACCG CGTTTACCCG AGCGTTCCGT ACGCCGGACC TGCGCAATAA GTTGCTCTTC 
ACACTGGGCA TCATCGCGCT GTTCCGGCTC GGCTCGGTTC TTCCGACTCC GGGTGTCAAC
AACGAAAACA TCGCCCGATG CCTCCAGCAG GCACAGGCCG GCGATGCCGG CAACATCTAC
GGCATGGTGC AGCTGTTCAG CGGTGGCGCC TTGCTGAAGC TGTCGGTGTT CGCGCTCGGC
ATCATGCCGT ACATCACCGC GAGCATCATC CTTCAGCTTC TGGTGGTGGT GATCCCGCGC
CTGGAAGCCC TCAAGAAGGA GGGGCAGGCC GGCCAGACCA AGATCACACA GTATACGCGT
TACCTGACGA TCGGCCTGGC GATCCTCCAG TCGACCGCCT TCATCGCCCT CGCGCGCACC
GGGCAGCTGT TCCCGCAGTG CCGTGAGGAC ATCCTGCTGG ACAAGGACAA CGTCTTCGCC
ATCGTCACGA TGGTGCTGAC GATGACCGCC GGTACCGCCG TCATCATGTG GCTGGGTGAG
CTCGTCACCG ACCGCGGCGT CGGCAACGGC ATGTCCATCC TGATCTTCAC CCAGGTCATC
GCGGTCTTCC CGGCCGAGCT GCTGAACATC GGCCGCCAGA AGGGCGCCTT CGTCTTCGCC
GTGGTGATCG TGACCGGTAT CGCGATGATC GCCCTGGTGG TCATGGTCGA GCAGGCCCAG
CGCCGGATCC CGGTGCAGTA CGCCAAGCGG ATGGTGGGCC GCCGGATGTA CGGCGGGACC
TCGACCTACA TCCCGCTGAA GGTGAACCAG GCGGGCATCA TCCCGGTCAT CTTCGCCTCC
TCGCTGCTCT ACCTGCCGCA GCTGGTCACG ACGCTGTTCA GCAACTCCCA GGAGGAGCCG
AACGCGGTCG TCCAGTGGAT CCAGCAGAAC ATGGTCACGG GTGACACCCC GGCCTACATG
ATCACCTTCT TCCTGCTGAT CGTCTTCTTC ACTTACTTCT ATGTGTCCAT TACCTTCAAC
CCCGTTGAAG TCGCTGACAA CATGAAGAAG TACGGTGGGT TCATCCCGGG TATCCGCCCG
GGCCGGCCGA CGGCTGAGTA CTTGAACTAC GTGCTCACGC GACTCACTGC TCCCGGTGCG
CTCTATCTGG GCCTGATCTC CATGGTGCCG ATCATCGCAC TGGCGCTCGT CGGCGCGAGT
CAGAACTTCC CGTTCGGAGG GACGAGCATT CTGATCATGG TTGGTGTCGG CCTTGACACC
GTGAAGCAGA TCGAGAGCCA GCTTCAGCAG CGTAACTACG AAGGCTTCCT GAAATAG
 
Protein sequence
MLTAFTRAFR TPDLRNKLLF TLGIIALFRL GSVLPTPGVN NENIARCLQQ AQAGDAGNIY 
GMVQLFSGGA LLKLSVFALG IMPYITASII LQLLVVVIPR LEALKKEGQA GQTKITQYTR
YLTIGLAILQ STAFIALART GQLFPQCRED ILLDKDNVFA IVTMVLTMTA GTAVIMWLGE
LVTDRGVGNG MSILIFTQVI AVFPAELLNI GRQKGAFVFA VVIVTGIAMI ALVVMVEQAQ
RRIPVQYAKR MVGRRMYGGT STYIPLKVNQ AGIIPVIFAS SLLYLPQLVT TLFSNSQEEP
NAVVQWIQQN MVTGDTPAYM ITFFLLIVFF TYFYVSITFN PVEVADNMKK YGGFIPGIRP
GRPTAEYLNY VLTRLTAPGA LYLGLISMVP IIALALVGAS QNFPFGGTSI LIMVGVGLDT
VKQIESQLQQ RNYEGFLK