Gene Sros_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0956 
Symbol 
ID8664229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp976090 
End bp977397 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content73% 
IMG OID 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_003336703 
Protein GI271962507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.611098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTATAT CCCCTTCGGA GGTGGTGTCG GTGAGGCGAC GGCGGGTCAG CCGGGTCGCG 
ACGATCAGCA TGCACACGTC CCCCCTGGAT CAGCCGGGCA CCGGGGACGC GGGCGGCATG
AACGTCTACA TCGTGGAAGC GGCCAGACGC CTGGCCCAGC TCGGGGTGGA GGTCGAGATC
TTCACCCGGC AGACGTCCCG TGACCTGCCT CCGGTCGCCG AGATCGCGCC GGGCGTGTCG
GTCCGCCACG TCACCGCCGG GCCGTACGAG GAGCTCGACA AGGGCGACCT GCCCGGCCAG
CTCTGCGGCT TCCTGTCCGG CGTGCTGCGC ACCGAGGCCA TGTACGAGCC CGGCCGCTAC
GACGTGATCC ACTCCCACTA CTGGCTCTCC GGCCAGGTGG GCTGGCTGGC CAAGGAGCGC
TGGGGCGTGC CGCTGGTGCA CACCATGCAC ACCATGGCCA AGGTGAAGAA CCTCCTGCTC
GCCGAGGACG ACAGGCCCGA GCCGACCGCG CGCGTGCTGG GCGAGGAGCA GGTCGTCCAG
GTGGCCGACC GGCTGGTGGC CAACACCCCG ACCGAGGCCC AGGAGCTCAT CGACCTGTAC
GGCGCCGCCC CCGGCCGGGT CGAGGTCGTC AACCCCGGGG TGAACCTCAA CGTCTTCCAG
CCCGCGTCCA AGGGCGCGGC CCGTCACCGG CTCGACCTGC CGCAGGACGC CCACGTGCTG
CTGTTCGTGG GCCGCGTGCA GCCGCTCAAG GCCCCCGACG TGCTGCTGCG CGCCGCGGCC
CGGATGCTCA TCGACGACCC CTCGCTCCGG TCGAGACTCG TCGTCGTCTG CGTCGGCGGC
CCCAGCGGCA ACGGCCTGGC CCGGCCCTCC TACCTCACCG ACGTGGCCGC CTCGCTGGGC
ATCTCCGACG TGGTCAGGAT CGTCCCCCCG GCGCCCCAGC ACGAGCTGGC CGACTGGTAC
CGCGCGGCCG ACGTGACGGT GGTCCCCTCG CACAACGAGT CGTTCGGCCT GGTCGCCCTG
GAGTCCCAGG CCTGCGGAAC GCCGGTCGCC GCGGCGTCCG TGGGCGGGCT GCGCACCGCG
GTGGCCGACG GCGTCTCCGG CGTGCTCGTC GAGGGGCACG ACCCGCAGGA CTGGGCGCGG
GTGCTCAGCC GGTTCGTGCA CCGGCCGGCC TGGCGGGACG CGCTCGCGGC GGGTGCGGTG
GCCCAGGCCG CGGCCTTCGG CTGGTCGGCC ACCGCCGCCC GGCTCGCGGA CGTCTACGCC
GGGGCGATGG CGAACCTGCA CCACGTCCCG ATCGCGGTCA GCTCGTAG
 
Protein sequence
MVISPSEVVS VRRRRVSRVA TISMHTSPLD QPGTGDAGGM NVYIVEAARR LAQLGVEVEI 
FTRQTSRDLP PVAEIAPGVS VRHVTAGPYE ELDKGDLPGQ LCGFLSGVLR TEAMYEPGRY
DVIHSHYWLS GQVGWLAKER WGVPLVHTMH TMAKVKNLLL AEDDRPEPTA RVLGEEQVVQ
VADRLVANTP TEAQELIDLY GAAPGRVEVV NPGVNLNVFQ PASKGAARHR LDLPQDAHVL
LFVGRVQPLK APDVLLRAAA RMLIDDPSLR SRLVVVCVGG PSGNGLARPS YLTDVAASLG
ISDVVRIVPP APQHELADWY RAADVTVVPS HNESFGLVAL ESQACGTPVA AASVGGLRTA
VADGVSGVLV EGHDPQDWAR VLSRFVHRPA WRDALAAGAV AQAAAFGWSA TAARLADVYA
GAMANLHHVP IAVSS