Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0786 |
Symbol | |
ID | 8664058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 802869 |
End bp | 803516 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003336543 |
Protein GI | 271962347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000169887 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG AGACAACGGG CCTGCGGGAG CTGAAGAAAC GCGAGACCCG CCAGACCATC TCGGACCACG CGACCCGGCT GTTCATGGAG CGCGGCTTCG ACAGGACGAC CATCGCCGAC ATCGCCACGG CGGCCAGGGT GGCCAAGATG ACCGTCACCA ACTACTTCCC GCGCAAGGAG GATCTGGCCC TCGACCACCA CGAGGAGTTC GTGGCCGGCC CGGCCCGCAC GGTCGCGGAG CGGGAGCCCG GCGAATCGGC CCTCGCCGCG CTCAGGCGGG CGTTCTTCAC GGGGGTGGAG CGCCACGACC CCGTCATCGG CTTCTCCGGC GCCCGGTTCG CCCGCATGAT CGCCGACAGC CCGACGCTGG TGGCCCGCAT CCGCGACCTG CACGACCTGC GCGAAGACGC CCTGACCGAG GTCCTGGCCG CCGAGACCGG AGCCGAGCCG TACGACATCC TCCCGCGCGC GGTGGCGACC CAGCTCGGCG GCGCCCACCG CGTGCTCTTC ACCGAGGTGC AGCGCCACAC CCTCGACGGC CGGAGCAACC AGGAGATCGC CGCCGCCGTC GCCGAATCCG CCCGCCAGGT CTTCGACCTG CTGGAGCCCG CCGTCGGCGG CTATGCCGTA CGGCGGGCGA CGGGCTGA
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Protein sequence | MSTETTGLRE LKKRETRQTI SDHATRLFME RGFDRTTIAD IATAARVAKM TVTNYFPRKE DLALDHHEEF VAGPARTVAE REPGESALAA LRRAFFTGVE RHDPVIGFSG ARFARMIADS PTLVARIRDL HDLREDALTE VLAAETGAEP YDILPRAVAT QLGGAHRVLF TEVQRHTLDG RSNQEIAAAV AESARQVFDL LEPAVGGYAV RRATG
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