Gene Sros_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0401 
Symbol 
ID8663669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp396096 
End bp400274 
Gene Length4179 bp 
Protein Length1392 aa 
Translation table11 
GC content69% 
IMG OID 
Productsensor histidine kinase/response regulator 
Protein accessionYP_003336174 
Protein GI271961978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG CCAATACCGT GCCCGACGTC GAGGAGCGAC GTTACAGCGA ATCGGATCTG 
AAGCCGATTC TTCAGACACT CATCACCTGG CGCGATGGTG ACTTCCGCCG TCGGGTGCCG
CACGCTCCTC CCGGGATCCT CAGTGAGATC CGCCTGCTGC TCAACGAGGT CGCCGACCGC
CGCGAGCACC TGGCCAACGA GCTGCACCGG GTCCGCCGCG AGGTGGTGAA GGAAGGCCGG
TTCAGCGAAC GCCTCACCGC GGGTCCGGGC GTGGGTTCCT GGGCCGAGAG CGTCGACTCG
GTGAACTCGC TGATCGACGC CCTGGTCGGG CCGGTCACCG GCGCGGCCGA CGTGATCGAC
GCGGTGGCCA AGGGAGACCT GTCCCGGCGC ATCGACCTCG ACCGCCGGGC ACGGGGCGAG
GTGCGCCGCC TCGGTAAGGC GATCAACGGC ATGGTCGACC AGCTCTCCCT GTTCACCTCC
GAGGTGACGC GCGTGGCGCG CGAGGTGGGC ACCGAGGGCC GTCTGGGCGG CCGGGCGAAC
GTGCGGGGCA TGTCGGGCAG CTGGCGTGAC CTCACCGAGG CCGTGAACAC CATGTCCAGC
CGCGTCTCCG CCCAGGTCCG CGACATCGCG CTGGTCACCA CGGCGGTCGC CAGGGGCGAC
CTGAGCCGTA AGGTCACCGT CGACGCGGTC GGCGAGATGT TCGAGTTGAA GAACACCGTC
AACACGATGG TCGACCAGCT CTCGGCGTTC GCCGAGGAGG TCACCCGCGT CGCCCGCGAG
GTCGGCACCG AGGGCGAGCT GGGCGGTCAG GCCCAGGTGC GCGGCGTCTC CGGCGTCTGG
AAGGACCTGA CCGACAACGT CAACGTCATG GCGAGCAACC TGACCACCCA GGTCCGCGCC
ATCGCGGCGG TGTCCACGGC GGTGGCCCAG GGCGACCTGT CCAAGAAGAT CACCGCGGAC
GCCCAAGGGG AGATCCTCCA GCTCAAGGAC ACCCTCAACA CCATGGTCGA CCAGCTGTCG
ATGTTCGCCG ACGAGGTCAC CCGCGTCGCC CGCGAGGTCG GCACCGAGGG CCAGCTCGGC
GGCCAGGCCC GGGTGCGCGG CGTCTCCGGC GTCTGGAAGG ACCTCACCGA CAACGTCAAC
TCCATGGCCA ACAACCTGAC CTACCAGGTC CGCAACATCG CCGAGGTCAC CACCGCGGTC
GCCACCGGCG ACCTGACCCG CAAGATCGAC GTGGACGCGC AGGGCGAGAT CCTCGCGCTC
AAGACCACCA TCAACACCAT GGTCGACCAG CTGTCCTCCT TCGCCTCCGA GGTGAGCCGG
GTCGCCCGCG AGGTCGGGTC GGAGGGCCAG CTCGGCGGCC AGGCCCAGGT GCGCGGCGTC
TCCGGCACCT GGAAGGACCT CACCGACAAC GTCAACGTCA TGGCCAACAA CCTGACCACC
CAGGTCCGGC AGATCGCGGC CGTCTCCACG GCGGTGGCCC AGGGCAACCT GTCCAAGAAG
ATCACCGCGG ACGCCCAAGG GGAGATCCTC CAGCTCAAGG ACACCCTCAA CACCATGGTC
GACCAGCTGT CGATGTTCGC CGACGAGGTC ACCCGCGTCG CCCGCGAGGT CGGCACCGAG
GGCCAGCTCG GCGGCCAGGC CCGCGTCCGA GGCGTCTCCG GCGTCTGGAA GGACCTCACC
GACAACGTCA ACTCCATGGC CAACAACCTG ACCTACCAGG TCCGCAACAT CGCCGAGGTC
ACCACCGCCG TCGCCAACGG CAACCTGACC CGCAAGATCG ACGTGAACGC GCAGGGCGAG
ATCCTCGCCC TCAAGACCAC CATCAACACC ATGGTCGACC AGCTGTCCTC CTTCGCCTCC
GAGGTCACGC GAGTGGCCCG CGAGGTCGGC TCCGAGGGCA AGCTGGGCGG CCAGGCCCGC
GTCGAGGGCG CCGAGGGCAT CTGGAAGCGC CTCACCGAGA ACGTCAACGA GCTGGCGGGC
CGCCTCACCA CCCAGGTCCG CGCGATCGCC GAGGTCACCA CCGCGGTCGC CACCGGCGAC
CTGACCCGTT CCATCACCGT CGACGCCGGG GGTGAGATCG GCGAGCTCAA GGACAACATC
AACACGATGG TGTCCGTGCT CCGCGACACC ACCAAGGCCA ACCAGGAACA AGACTGGCTC
AAGTCCAACC TGGCCCGGAT CTCCCGTCTC ATGCAGGGCC ACCGCGACCT GATGGAGGTC
GCCAAGCTGA TCATGAGCGA GCTGACCCCG CTGGTCTCCG CCCACTACGG GGCCTTCTAC
CTGGCCGAGC CCACCGGCGA CCACGACCTC TTCATGATCG CCGGGTACGG CGCGCGCCCC
GGCTCCAAGA TCCGGAACCG CTTCGCGGTC GGCGAGGGGA TCGTGGGACA GGCCGCGTTC
GAGGGCAAGC GGATCATCCT GGAGAGCGTC CCCGCCCAAT ACCTCACCGT GGACAGCGGC
CTCAGCTCCT CGGTTCCGGC CCAGATCGTC GTGGTGCCGA TCCTGTTCGA GACCCAGGTC
CTGGGCGTCG TGGAGCTGGC CTCGTTCAGC CAGTTCGGCG AGGTCCACCA CGACTTCATG
ACCCAGCTCG TCGAGACCAT CGGCGTCACG ATGAACACGA TCATCGCCAA CTCCCGGACC
GAGGACCTGC TGACCGAGTC GCAGCGCCTC ACCACCGAGC TGCAGGAACG CTCCGACGAG
CTCCAGCGCC AGCAGGAGGA GCTGCGCCGC TCCAACGCCG AGCTGGAGGA CAAGGCCGCG
CTGCTGGCCA AGCAGAACCG GGCCATCGAG ATCCAGAACT TCCAGATCGA GCAGGCCCGC
CGCACGCTGG AGGAACGCGC CGAGCAGCTC GCGGTCTCCT CGCGCTACAA GTCCGAGTTC
CTGGCCAACA TGTCCCACGA GCTGCGCACC CCGCTGAACA GCCTGCTCGT GCTGGCCAAG
CTGCTCACCG AGAACGCCGA GGGCAACCTC ACCGTCCAGC AGGTGGAGTT CGCCAGGACC
ATCCACGGCG CCGGCTCCGC CCTGCTCCAG CTGATCAACG ACATCCTGGA CCTGTCCAAG
GTCGAGGCCG GGCGGATGGA CATCCACCCC CAGCAGATCT CCCTGCCCAA GCTCGTCGAC
TACTTCGAGG CCACCTTCGC ACCGCTGGCC CAGGACAAGG GGCTGTCGTT CGCCGTCGAG
GTGGACTCGT CGGTCCCGCA GGAGCTCCGC ACCGACGAGC AGCGCCTCCA GCAGGTGCTG
CGCAACCTGC TCTCCAACGC GATCAAGTTC ACCCCCAAGG GCGAGGTACG GCTGCGCGTG
ATCCACGCCC AGCGCGCGGT GGCCTTCGTG GACGACACCC TGCGCGGCGC CGACGGCATC
CTCGCCTTCG AGGTGGTGGA CACCGGCATC GGCATAGCCG CCGACAAGCT GGAGGTCATC
TTCGAGGCGT TCCGCCAGGC CGACGGCACC ACGAGCCGCA AGTACGGCGG GACGGGCCTG
GGCCTGTCCA TCTGCCGCGA GATCGCCCGC CTGCTCGGCG GCGAGATCCA CGTGGTCAGC
GAGGTGGGGC AGGGAAGCAC CTTCACCCTC TACCTGCCGC CGTCCTACGG AGGGCCGCTG
TCCTCGCGCG ACGGCGGGGC GGCCGCGCCG AACTCCTCGC CGCGCAACCA GACGCTCATC
GGAGTGCTGG AGGAGCCCGA CGACCTTCCG GAGCTGGCGC TGCCGGAGGA ACTGCCGGTC
TCGCACTTCC CGCAGAACGA GGGCCCGGCG TGGAAGGGCG GCGACGATCC GCTGACCGGA
GCCAAGATCC TGATCGTGGA CGACGACATC CGCAACGTCT TCGCCCTGAC CAGCGTCCTC
GAACGGTACG GCTCCACGGT GGTCTACGCC GAGAACGGCC GGGAGGGCAT CGAGCAGCTC
GAACGCAACG AGGACGTCGC GCTGGTCCTG ATGGACATCA TGATGCCCGA GATGGACGGC
TGGGCCACCA CGTCCGCGAT CCGGCGGATG CCCCAGTTCG CCGACCTGCC GATCATCGCG
CTTACCGCTA AGGTCATGCA GGGAGACCGG GAGAAAAGCA TCGCGTCCGG CGCCTCCGAC
TACGTGCCCA AACCCGTGGA CGTCGACCGC CTGCTGGAAC GCCTGCGCGG CTGGCTCACC
CGGGGCAAGC CAGCAGGCGA CTCCGACGAA GGGGCGTGA
 
Protein sequence
MTTANTVPDV EERRYSESDL KPILQTLITW RDGDFRRRVP HAPPGILSEI RLLLNEVADR 
REHLANELHR VRREVVKEGR FSERLTAGPG VGSWAESVDS VNSLIDALVG PVTGAADVID
AVAKGDLSRR IDLDRRARGE VRRLGKAING MVDQLSLFTS EVTRVAREVG TEGRLGGRAN
VRGMSGSWRD LTEAVNTMSS RVSAQVRDIA LVTTAVARGD LSRKVTVDAV GEMFELKNTV
NTMVDQLSAF AEEVTRVARE VGTEGELGGQ AQVRGVSGVW KDLTDNVNVM ASNLTTQVRA
IAAVSTAVAQ GDLSKKITAD AQGEILQLKD TLNTMVDQLS MFADEVTRVA REVGTEGQLG
GQARVRGVSG VWKDLTDNVN SMANNLTYQV RNIAEVTTAV ATGDLTRKID VDAQGEILAL
KTTINTMVDQ LSSFASEVSR VAREVGSEGQ LGGQAQVRGV SGTWKDLTDN VNVMANNLTT
QVRQIAAVST AVAQGNLSKK ITADAQGEIL QLKDTLNTMV DQLSMFADEV TRVAREVGTE
GQLGGQARVR GVSGVWKDLT DNVNSMANNL TYQVRNIAEV TTAVANGNLT RKIDVNAQGE
ILALKTTINT MVDQLSSFAS EVTRVAREVG SEGKLGGQAR VEGAEGIWKR LTENVNELAG
RLTTQVRAIA EVTTAVATGD LTRSITVDAG GEIGELKDNI NTMVSVLRDT TKANQEQDWL
KSNLARISRL MQGHRDLMEV AKLIMSELTP LVSAHYGAFY LAEPTGDHDL FMIAGYGARP
GSKIRNRFAV GEGIVGQAAF EGKRIILESV PAQYLTVDSG LSSSVPAQIV VVPILFETQV
LGVVELASFS QFGEVHHDFM TQLVETIGVT MNTIIANSRT EDLLTESQRL TTELQERSDE
LQRQQEELRR SNAELEDKAA LLAKQNRAIE IQNFQIEQAR RTLEERAEQL AVSSRYKSEF
LANMSHELRT PLNSLLVLAK LLTENAEGNL TVQQVEFART IHGAGSALLQ LINDILDLSK
VEAGRMDIHP QQISLPKLVD YFEATFAPLA QDKGLSFAVE VDSSVPQELR TDEQRLQQVL
RNLLSNAIKF TPKGEVRLRV IHAQRAVAFV DDTLRGADGI LAFEVVDTGI GIAADKLEVI
FEAFRQADGT TSRKYGGTGL GLSICREIAR LLGGEIHVVS EVGQGSTFTL YLPPSYGGPL
SSRDGGAAAP NSSPRNQTLI GVLEEPDDLP ELALPEELPV SHFPQNEGPA WKGGDDPLTG
AKILIVDDDI RNVFALTSVL ERYGSTVVYA ENGREGIEQL ERNEDVALVL MDIMMPEMDG
WATTSAIRRM PQFADLPIIA LTAKVMQGDR EKSIASGASD YVPKPVDVDR LLERLRGWLT
RGKPAGDSDE GA