Gene Sros_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0123 
Symbol 
ID8663388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp125950 
End bp126555 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional activator, TenA family 
Protein accessionYP_003335921 
Protein GI271961725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.155618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CTGCAGAACT CCATGCCATC GGCCGCCCGC TCGTCGAGGC GCAGCTCGCC 
CACCCGACGG TGGTGGGGAT CGCCAAGGGG AACCTGGCGG AGCCGGTGTT CCGGTCGTGG
CTGGAGCAGG ACTACCTGTT CCTCCTCGAC TACGTGCGGG TGTTCTCACG GCTGGCCTGG
CAGGCCCCGG ACGGGCACCT GGGCGACCTG GTGGACCTGG CCCACGCCAC CTTCCACGAG
GAGCTGGCCC TGCACCGGTC CCTGTCGGCC GAGTTCGGCG CCGACCTCGA CGGAGCGAAG
AAGGGGCCGG CCTGCGTGGC CTACACCTCC TTCCTGCTCG ACTCCGCGGC GGACTACGCC
GACGGCCTGG CCGCGCTCTA CCCCTGCATG TGGGGCTACT CCACCCTCGG ACGCGTCCTC
GCCGAGAACC CTCCGGCCGA GCCGCGCTAC CGGGCCTGGG TCGATACCTA CGCGCATCCC
GGCTTCGCCG AGCTGACCGG TCGCATCGCC GTGATGATCG ACGAGGCCGT GCCGGACCTC
GGCAGGGCCG GGGCACTGTT CACCGAGGGG ATGGCCCACG AGCTCGCCTT CTGGGACGTG
CCCTGA
 
Protein sequence
MSISAELHAI GRPLVEAQLA HPTVVGIAKG NLAEPVFRSW LEQDYLFLLD YVRVFSRLAW 
QAPDGHLGDL VDLAHATFHE ELALHRSLSA EFGADLDGAK KGPACVAYTS FLLDSAADYA
DGLAALYPCM WGYSTLGRVL AENPPAEPRY RAWVDTYAHP GFAELTGRIA VMIDEAVPDL
GRAGALFTEG MAHELAFWDV P