Gene Sros_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0072 
Symbol 
ID8663335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp71050 
End bp72192 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335872 
Protein GI271961676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.484765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCCA CCCTGGGATT GCGACCGGTC GGGGAAGGTG AGCGCCGGCT CGCCCCCGAC 
CTCGCCAGAG GGGCCATGCT GGCGCTGATC GCCGTGGCCA ACTCCGCCGC CTACCTGTAC
GGCCGTCCGT ACGGCATCCG GCAGCACATC ATCGAGCACG ACCTGCCGGA CCGGGTGACG
GGGGCACTGG CCATGACATT CGTGGACGGG CGGGCCTACC CGATGTTCGC CGCGCTGTTC
GGCTACGGCA TGGTGCAGAT CTGGAATCGG CGGCGCAGCG ATGACGAGGG GCGGCGGGTC
CTGAAGCGGC GGAGCCTGTG GCTGCTCGTG TTCGGGGCGG TCCACGGCAC GCTGCTGTTC
TCCGGGGACG TGCTCGGCGT CTACGGGCTG CTCGGGCTCG CGCTATGCCG GTTGCTGCGG
GTGCGTGACC GGATCCTGCT GATCCTCGCC GGGGCCTGGC TCGTCCCCGT CGCCCTGTCG
TCCGCGCTGG TCTACAGCAC ACCGCACGGC ACGGCACAGC GGTCGTTCTT CTGGTCGCTC
GCAATCGAGG ATCCGCTGAC GGCTCTGGCG CTGCGGCCGA TCGAGTGGGT GATGACCCCG
GTCGGGATGA TGGGCGTGGT CACCGCCGCG CTCGTGGGCG TCTGGGCGGG GCGGCGGGAG
CTCCTGACCG TGCCGGACGG GCTGGTACGG CGGGCCGCGG TGTGGGGGCC GCTCGCCGGG
ACGCTCGGTG GGCTCCCCCT GGGGCTGGTC GCAGGCGGGT TCCTCGGCGC GGACGGACCC
GCCGCGGTGA TGGCGCTCAA CGCCGCCCAC GTGGTGTCGG GCATCGCCGG CGGGCTGGGG
TACGCGGCAC TGATCGCTCT GGTCTCGCGG CGGATCGGGA CGAGGCGCGG TCCGCTGGTG
GCGGCGCTGT CGGCCTGCGG CCAGCGCTCG ATGACGTGTT ATCTTCTCCA GTCGGTGGTG
TTCGTGACGC TTCTGTCCCC TTATGCGATC GGGCTCGGCG GGCGGCTGGG CTCCGCCGCC
ACGGTCGCGT TGGCGGCCGG CACGTGGGCC GCGACGGTGG TCGCGGCTGA GTTCATGCGC
AGAGCCGGAG TACGCGGGCC CGCCGAGACA CTGCTGCGGC GCCTGACCTA TCCGCGCAGA
TGA
 
Protein sequence
MVSTLGLRPV GEGERRLAPD LARGAMLALI AVANSAAYLY GRPYGIRQHI IEHDLPDRVT 
GALAMTFVDG RAYPMFAALF GYGMVQIWNR RRSDDEGRRV LKRRSLWLLV FGAVHGTLLF
SGDVLGVYGL LGLALCRLLR VRDRILLILA GAWLVPVALS SALVYSTPHG TAQRSFFWSL
AIEDPLTALA LRPIEWVMTP VGMMGVVTAA LVGVWAGRRE LLTVPDGLVR RAAVWGPLAG
TLGGLPLGLV AGGFLGADGP AAVMALNAAH VVSGIAGGLG YAALIALVSR RIGTRRGPLV
AALSACGQRS MTCYLLQSVV FVTLLSPYAI GLGGRLGSAA TVALAAGTWA ATVVAAEFMR
RAGVRGPAET LLRRLTYPRR