Gene Sros_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0062 
Symbol 
ID8663325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp63468 
End bp64724 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative membrane transport protein 
Protein accessionYP_003335862 
Protein GI271961666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.640827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAGCT ACCGCCGCGA TCTGGACATA CTCCGAGATC GGCGCTTCAC CCTGCTGCTC 
GTCGCCCGGA CCATCTCGGT CCTGGGCAGC TCGTTCGCAC CCGTGGCCCT CGCCTTCGGC
ATCCTCGCCC TGCCGGGGGC GACGGCCACG ACGCTGTCGG TGGTCCTCGC CGCGGAGGCG
TTGCCGATGG TGGCGTTCAT GCTCGTGGGC GGAGTGATCG CCGACCGGCT GCCCCGGCAC
CGGGTGATGA TGGCCGGTGA GACGATCAAC GCGGCGGCGT TCTTCTGCCT CGCCGCGATG
CTGCTCACCG GCTGGACACC GCTCCCCGCC CTGGTGACGG CGGCGGCGGT CAGCGGTGTC
GCGATGGCGA TCCTCTTCCC CGCCCTGACC GGCATCATCC CCGATGTCGT CCCCGCCGAC
CGGCTGCAGA CCGCCAACGC CCTGCTGGGA CTGGGAGCCA ACAGCTCGCG CGTCGCCGGG
CTCATCCTGA GCGGGGCCAC GGTGGTCCTG CTCGGCGGCG GCTGGGCGCT CGTCGTCAGC
GGCGCCATGT TCGCCGTGGC GGCCGTGCTC ATCGCGGCCC TCCGCCTCAC CCCGGCGGAA
CGCTCCGCGG CCGGGAGCCA CTCGGTCCTC GCCGACCTGC GCGGCGGCTG GCGCGAGTTC
GTCTCCAGGC AGTGGCTGTG GGTGGTGGTC GCGCAGTTCT CGGTGCTGGT GATGGCCGTG
CAGGCCGCGC ACGGCGTGCT CGGGCCACTG GTGGCCAAGG AGCACCTGGG CGGGGCGGCG
GCCTGGTCGG CGATCCTGGC CGGCGAGGCG GTCGGCATGA TCGGCGGCGT CTTCGTCGCG
CTGCGGCTGC GGCCCCGCCG CCCCATCCTG GTCGGCACGA TCCTCACCGT GCCCACGGCG
CTGCCCTACC TGCTGCTCGG CCTGGGGACC CCGCTGTGGA CGATCGTCCT CGGGGCGGTC
GTGATGGGGG TCTGCTTCGA CATCTTCGGC GTGCTGTGGA ACACCACGAT GCAGCGGGAG
ATCCCGGCCG AGTCGCTGTC GCGGGTCAGC TCCTACGACG CCCTCGGATC CCTGATGTTC
GGCCCGGTCG GCCTGCTGGT GGCGGGGCCG CTGGCGATCG TGATCGGCCC GAGGCCCGCC
CTGCTCGGAT GCGCCGCGGT CGTCGTGCTG TCCTCCCTCG CCGCGCTGCT CTCCCCGGGG
GTGCGGGGCC TCCGTGCCCC GGCACCCGCG GAGGAGACCG GGGCTCTGTC GCACTGA
 
Protein sequence
MHSYRRDLDI LRDRRFTLLL VARTISVLGS SFAPVALAFG ILALPGATAT TLSVVLAAEA 
LPMVAFMLVG GVIADRLPRH RVMMAGETIN AAAFFCLAAM LLTGWTPLPA LVTAAAVSGV
AMAILFPALT GIIPDVVPAD RLQTANALLG LGANSSRVAG LILSGATVVL LGGGWALVVS
GAMFAVAAVL IAALRLTPAE RSAAGSHSVL ADLRGGWREF VSRQWLWVVV AQFSVLVMAV
QAAHGVLGPL VAKEHLGGAA AWSAILAGEA VGMIGGVFVA LRLRPRRPIL VGTILTVPTA
LPYLLLGLGT PLWTIVLGAV VMGVCFDIFG VLWNTTMQRE IPAESLSRVS SYDALGSLMF
GPVGLLVAGP LAIVIGPRPA LLGCAAVVVL SSLAALLSPG VRGLRAPAPA EETGALSH