Gene Sros_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0042 
Symbol 
ID8663305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp46222 
End bp46788 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335845 
Protein GI271961649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.53163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG CACCATATGT CGACAACCTC CGCCGCGAGC TGGCGGTCGC CGCCGAGGCC 
AGTGGCCCGG ACGCGCGCGC ACTCGCCGAG CGTCTCACCG CATCGCTCGA ATCGGCCGTC
CGGCTCACCC TGCTCGAGGC GCTGTCGGCC GCCGCGGGCG AGATCACCCG TGATCTCGCG
CCGGGCTCGG TCGACGTACG GCTGCGCGGG CGTGACCTCG ATTTCTCCGT GACACCGGCG
CCGGCCGAGC GGGCGCCGGA ACAGGCGCGC GGGAGCAGCT TGAGGAGTGC GCTGGCCGGC
GCGGTGGAGG TCGCGATGGG CGTCCGGGCG CCCGTTCCGG AGACACCGTC GGAGGCCGAT
GAGGGCGGCA CGTCGCGGGT CTCGCTCCGC GTCCCCGATC ACCTCAAATC GCGCATCGAG
AAGGCGGCCG GCAGGGAAGG GCTCTCGGTC AACGCCTGGC TGGTCCGCGC CGTGTCCGCG
GCGCTCGAAC CCGGCGACGA GGGCCGTCGC TCCGACCGGG GGGGTGATCC GAGAACCGGG
CGGCACTACA CCGGCTGGGT GCGCTAG
 
Protein sequence
MDLAPYVDNL RRELAVAAEA SGPDARALAE RLTASLESAV RLTLLEALSA AAGEITRDLA 
PGSVDVRLRG RDLDFSVTPA PAERAPEQAR GSSLRSALAG AVEVAMGVRA PVPETPSEAD
EGGTSRVSLR VPDHLKSRIE KAAGREGLSV NAWLVRAVSA ALEPGDEGRR SDRGGDPRTG
RHYTGWVR