Gene Sros_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0039 
Symbol 
ID8663302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp43461 
End bp44264 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003335842 
Protein GI271961646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.953662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC TTCAGATGGC GATCGCCGAT GGAATGACGA TCACCAAGCG CAACACCCTC 
AAGATCAAGC GAGCACCCGA CCTGCTGGGC GGCGCGATCA TTCTCCCGAT CGTGTTCGTG
CTGCTGTTCG CCTATGTCTT CGGCAGCATG ATCGATATAC CGGGCATGTC CTATCAGGAG
TACATGATCC CCGGGATCTT CGTCCAGACG GTCATCATGA GCGGGCAGAT CACCGGTTAC
ACCCTGGTCC TGGACCTGCA GAAGGGCGTC TTCGACAGGT TCCGCACGCT GCCCATGGCG
CCGTCGGCGG TGCTGACCGG CCAGACCGTC GCCGACGTGC TGATGAACGT GAGCAGCGTC
GTCGCGATGT CGGTGATGGG GCTGATCGTC GGATGGCGGA TCCACTCGGC CCCGCACGAA
GCCGTCCTGG GCTTCCTGCT GCTGCTGCTG TTCGCCTACG CGTTCTCCTG GGTGACGGCG
ACGGTCGCGC TGGCCCTGCG CACGCCCGAG GTCTTCAACA ACATCGCCAC TGTCGTGTCG
ATGCCGCTGG TCTTCCTGTC CAACGCCTTC GTCGACAGTG CGCGACTGCC TGGACCGCTG
AAGGCCGTCG CCGAATGGAA CCCCGTCTCC ACGATCATCC AGGCGGTGCG CGAGCTCTTC
GGCAACACCC ATCCCGCCAT TCCCGTTCCC GACGCATGGC CGCTCCGGCA CGCCGTGGTG
GCGTCGCTGC TGTGGTCGGC GCTGCTCCTG GCCGTGTTCG TGCCTCTGTC CACGCGGCTC
TACAAGAAGG CCGTCAGCCG CTGA
 
Protein sequence
MNALQMAIAD GMTITKRNTL KIKRAPDLLG GAIILPIVFV LLFAYVFGSM IDIPGMSYQE 
YMIPGIFVQT VIMSGQITGY TLVLDLQKGV FDRFRTLPMA PSAVLTGQTV ADVLMNVSSV
VAMSVMGLIV GWRIHSAPHE AVLGFLLLLL FAYAFSWVTA TVALALRTPE VFNNIATVVS
MPLVFLSNAF VDSARLPGPL KAVAEWNPVS TIIQAVRELF GNTHPAIPVP DAWPLRHAVV
ASLLWSALLL AVFVPLSTRL YKKAVSR