| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0004 |
|---|
| Symbol | |
|---|
| ID | 8663266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4648 |
|---|
| End bp | 5589 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 6-phosphogluconate dehydrogenase-like protein |
|---|
| Protein accession | YP_003335809 |
|---|
| Protein GI | 271961613 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.118647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG GCATGGTCGG ACTGGGCAAG ATGGGCGGCA ACATGGCCGA GCGGCTGCGC
CGCGGAGGTC ACGACGTCGT CGGCTACGAC CGCGATCCGG CGGTCAGTGA CGTCTCAAGC
CTGAAGGACC TGGTGGACCG GCTCCAGGAG CCGCGCGCGG TGTGGGTCAT GGTGCCCGCG
GGAGCGCCGA CCCAGGCGAC GGTCGAGGAG CTCGGCAACC TGCTGTCGGC CGGCGACATC
GTGATCGACG GCGGCAACTC GCACTATCTG GACGACCAGA AGCACGCCGC CGAGCTGGGG
GCCAAGAAGA TCGGCTTTGT CGACTGCGGC GTCAGCGGCG GGATCTGGGG CCTGGAGAAC
GGCTACGCGC TGATGGTCGG CGGCTCCAAG CCCGACATCG AGCGGCTGAT GCCGATCTTC
GAGACCCTCA GGCCCGAGGA GGGCGGCTTC GTCCACGCGG GCGACGTCGG CGCCGGCCAC
TTCGCCAAGA TGGTCCACAA CGGCATCGAG TACGGCATGA TGCAGGCCTT CGCCGAGGGC
TGGGAGCTGC TTGAGGCCTC CGACGTCGTG ACCGACGTGC CCGGCGCCTT CAAGAGCTGG
CGGCACGGCA CGGTCATCCG TTCGTGGCTG CTGGACCTGA TGGTCCGCGC GCTCGACGAG
GACCCGGCCC TGGCCGAGCT GAAGGGCTAC GCGCAGGACT CCGGCGAGGG CCGGTGGACG
GTGCAGGCGG CCGTGGACCA CGCGGTGCCG CTGCCGGTCA TCACCGCCGC GCTGTACGCC
AGGTTCGCCT CCCGGCAGGA GGACTCCCCG GCCATGAAGG TCGTCGCGGC CCTGCGCAAC
CAGTTCGGCG GGCACGCCGT CACCGCCAAG GAGGGCGAGT TCGCCAAGGG CGCCGACGCC
CCCGGCGCCG ACGTCGTGCC GCCGGTGGAG GTCGACAAGT AG
|
|---|
| Protein sequence | MQIGMVGLGK MGGNMAERLR RGGHDVVGYD RDPAVSDVSS LKDLVDRLQE PRAVWVMVPA
GAPTQATVEE LGNLLSAGDI VIDGGNSHYL DDQKHAAELG AKKIGFVDCG VSGGIWGLEN
GYALMVGGSK PDIERLMPIF ETLRPEEGGF VHAGDVGAGH FAKMVHNGIE YGMMQAFAEG
WELLEASDVV TDVPGAFKSW RHGTVIRSWL LDLMVRALDE DPALAELKGY AQDSGEGRWT
VQAAVDHAVP LPVITAALYA RFASRQEDSP AMKVVAALRN QFGGHAVTAK EGEFAKGADA
PGADVVPPVE VDK
|
|---|
| |