Gene Sros_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0003 
Symbol 
ID8663265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3884 
End bp4615 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335808 
Protein GI271961612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0291657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA TCAAGGCGTG TCTCAACGGG AGCAGGAAGG CCGGGGAGCA CCCGGCCCTT 
CCCCTGACAC CCCTGGAGCT CGCTGAGGCG GCCCGTGAGG CCCGTGAGGC GGGTGCGGCG
GCCGTGCACA TGCATCCGCG CGACGAGGCG GGCAGCGAGT CACTCAGCGC CGTCCACATC
GGTGCGGCCG TCCGCGCGGT ACGGCGGGCC TGCCCCGGCC TCCCCGTCGG GGTGAGCACG
GGGCTGTGGA TATCGGGCGG GGACGTGGAG GCGAGGCGCG AGGCCGTGCG CGGCTGGGCC
GCGCTCCCCG CGCGTGACCG GCCGGACTTC GCGTCGGTGA ACCTCTCCGA ACCCGGCTTC
TCCGACCTGT GGCATGATCT CCGACGGCTC GGCGTGGGGG TCGAGGCCGG AGTCTGGTCC
GTGGACGACG CCGACGCGCT CGCCTCGACG GGGCTGGAGT GCGTGCGGGT TCTCGTCGAG
ATCATCGGAG GCTCCGCCGA CACCGCCGTG TCGCGCGCGC ACGCCGTGCT CGGCCGTCTG
GACGAGCTCT CCGTCCCCGG CCCCAGGCTC CTCCACGGGG AGGAAGGACC GGCTTGGATA
CTTGTGGACG AGGCAGGGCA GTTGGGCCTG GCCGCGCGCA TCGGTCTGGA GGACGTCCTC
CACAGCCCTG TGGGTGATCC TGTTGACGGA AACGCCGATC TGGTACGGCT TGCGCTGGCA
CGCCGGGTGT AG
 
Protein sequence
MTMIKACLNG SRKAGEHPAL PLTPLELAEA AREAREAGAA AVHMHPRDEA GSESLSAVHI 
GAAVRAVRRA CPGLPVGVST GLWISGGDVE ARREAVRGWA ALPARDRPDF ASVNLSEPGF
SDLWHDLRRL GVGVEAGVWS VDDADALAST GLECVRVLVE IIGGSADTAV SRAHAVLGRL
DELSVPGPRL LHGEEGPAWI LVDEAGQLGL AARIGLEDVL HSPVGDPVDG NADLVRLALA
RRV