Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_999 |
Symbol | uvrC |
ID | 8657930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 933936 |
End bp | 935759 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | excinuclease ABC, C subunit |
Protein accession | YP_003330444 |
Protein GI | 270308386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGCG AAACCCTGCA AAACCAGATA GCCAGTTTAC CCGAAAATCC CGGCGTTTAC CTGATGAAAA ACGCCCAGGG AGAGATTATT TATGTAGGCA AAGCAGCTGT TTTAAAAGAC AGGGTCAAAT CGTACTTTGC ACCTCCCTCC CGCCTTGAAC CCAAAACCCG TCAACTGGTC AGCCAGATAA ACGAACTGGA ATACCTGATA ACCGGGTCTG AACAGGAAGC TTTGATACTG GAACTGAACC TGATAAAGAG GCACCGCCCC TATTTCAATG TCCGCCTGAA GGACGATAAG GGTTTTCCGT ACCTGAAAAT AACTTTAAAC GAAAAATGGC CGCGTATTTA TATAACCCGC AGTATGGCAG ATGACGGCGG CAGGTATTTC GGCCCGTTTG CCAGCACCCG TTCCGTCCGC CATACCCTGC AGGTGCTAAA AGAGCTTTTC CGTTTCCGCT CTTGCAACCG CACCGAACCG GAAAAACGTA GCCGCCCCTG TCTGGAATAC GATATCCACC AGTGCCTTTC ACCCTGCACC GGCAAAATAA GCAAGCAGGA TTATGACCAC CTTATCTCAC AGGCCATACT CTTTCTGGAG GGCAAACAGG ATAAGGTGCT GAAGCTGCTT AACAAGCTTA TGAACGAAGC CTCGGCCCGG CTGGATTATG AAACCGCCGC CCTCCGCCGT GACCAGATAT CATCTATAAA AGAGGTGATT GAAGGACAGC AGCTGGCCGC CAGAGTAAGC GGCGAACAAG ACGCCATTGC CTTTGCACAG GAAGGAGATC TGTCCATGGT GCAGGTTTTC TTTATCCGGC GGGGCAAACT TATCGGGCGG GAAAGCTTCA GCCTGCAGGG TACCCGCGAA GAAAAACCGG GTGATATCCT TTCGGAATTT GTAAAACAGT TTTACCACTC CTCCACCCAG ATACCGCCAA AAATAGTTAC CCAGTACCCG CTTTCAGACC GCGAAATACT GGAAAAGTGG CTGTCTGAAA GGCGGGGTGG CAAAGTACAG ATAACGGCGG GGCTTCGCGG ACAGCCCAAA GACCTTATAA ATATTGTAGC CGAAAATGCC AGGGAACAGC TAAAACAGGC ACGGATAAAA AACCTGTCTT CAGCCGTTAC TTTGACAGAT GCGCTGGAAG AACTGCAAAC CGCGCTGGGA CTGCCTCTGC CGCCGCAGCG GATAGAAGGC TACGATATAT CCAATATACA GGGCACCAAT GCCGTAGGCA GCATGGTGGT CTTTGAAAAC GGTAAACCCC AGAAAGCCCA TTACCGCCGT TTCCGCATCA AAACCGTAAA GGGTGCGGAT GATTTTTCCA TGCTCAAAGA GGTCATCAGC CGCCGCTTCG GCAGGCTAAA CAAAGACAAT GCCGGTGAAA GTTTTGCCCG GCGGCCCTCA CTCATGCTGA TAGACGGCGG CAAAGGGCAA TTAAGCTCAG TCAAAGAAAC ATTAGATACC CTGGGTCTTG AGGGGCAGGC TGTAATAGGT CTGGCTAAGG AATTTGAAGA AATTTATCTG CCCGGAAAAT CCGCACCCAT CAGGCTTACG GCCAACTCTC CTGCCCTTCA GCTGCTTCAG CGGGTACGTG ACGAAGCCCA CCGCTTTGCG CTGGGGTATC ACCTGAATAT CCGCCATAAA TCAGGGCTGA CTTCGACACT GGACGGGATT CCCGGTATCG GCCCAAGCCG CCGCCGCCTG CTTATCAAAA CATTCGGTTC GGTTGCCGGT ATCCGTCAGG CCAGCCTTGA TGAGCTTTCA CAGGTAAAGG GTATAAATCA GGCACTTGCC CTGTCTATTA AGGAACTGCT CTAA
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Protein sequence | MPSETLQNQI ASLPENPGVY LMKNAQGEII YVGKAAVLKD RVKSYFAPPS RLEPKTRQLV SQINELEYLI TGSEQEALIL ELNLIKRHRP YFNVRLKDDK GFPYLKITLN EKWPRIYITR SMADDGGRYF GPFASTRSVR HTLQVLKELF RFRSCNRTEP EKRSRPCLEY DIHQCLSPCT GKISKQDYDH LISQAILFLE GKQDKVLKLL NKLMNEASAR LDYETAALRR DQISSIKEVI EGQQLAARVS GEQDAIAFAQ EGDLSMVQVF FIRRGKLIGR ESFSLQGTRE EKPGDILSEF VKQFYHSSTQ IPPKIVTQYP LSDREILEKW LSERRGGKVQ ITAGLRGQPK DLINIVAENA REQLKQARIK NLSSAVTLTD ALEELQTALG LPLPPQRIEG YDISNIQGTN AVGSMVVFEN GKPQKAHYRR FRIKTVKGAD DFSMLKEVIS RRFGRLNKDN AGESFARRPS LMLIDGGKGQ LSSVKETLDT LGLEGQAVIG LAKEFEEIYL PGKSAPIRLT ANSPALQLLQ RVRDEAHRFA LGYHLNIRHK SGLTSTLDGI PGIGPSRRRL LIKTFGSVAG IRQASLDELS QVKGINQALA LSIKELL
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